Pairwise Alignments

Query, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 453 a.a., signal recognition particle protein from Pectobacterium carotovorum WPP14

 Score =  681 bits (1756), Expect = 0.0
 Identities = 347/457 (75%), Positives = 403/457 (88%), Gaps = 4/457 (0%)

Query: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
           MFENLTDRLSRTL+NISGRGRLTEEN+KETLREVRMALLEADVALPVVR+F+N VKERAV
Sbjct: 1   MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV 60

Query: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120
           G EV KSL+PGQ F+KIV++EL  +MGE N  L+LA QPPAVV+MAGLQGAGKTTSV KL
Sbjct: 61  GHEVNKSLTPGQEFVKIVKNELVSAMGEINAELNLAAQPPAVVLMAGLQGAGKTTSVGKL 120

Query: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180
           GK LR +HKK VLVVSADVYRPAAIKQLETLA +V V+FFPSDV +KP+ I + A+ HAK
Sbjct: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVQEKPLAIVQRALQHAK 180

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240
           LKF DV+++DTAGRLHVD+AMMDEIK +HAA+KP+ETLFVVDAMTGQDAANTAKAFNEAL
Sbjct: 181 LKFYDVLLVDTAGRLHVDDAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL 240

Query: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300
           PLTGVILTK+DGDARGGAALSIRHITGKPIKFLGVGEKT+ALEPF+P+R+ASRILGMGDV
Sbjct: 241 PLTGVILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPERVASRILGMGDV 300

Query: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360
           LSLIE++E  VD+ +A KLA+K+K+G  FDL DF +QL+QM+NMGGM SM+ K+PG+GQL
Sbjct: 301 LSLIEDIESKVDRTQAEKLANKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKMPGMGQL 360

Query: 361 PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLLKQ 420
           P +  +Q+ D K+  +MEAIINSMT +ER  P++IKGSRKRRIA GSG ++QDVNRLLKQ
Sbjct: 361 PDNVKSQMDD-KVLVRMEAIINSMTRQERAKPEIIKGSRKRRIAQGSGMQVQDVNRLLKQ 419

Query: 421 FTQMQKMMKKMSAKGGMQKMMRGMRGMMPGGMKFPGR 457
           F  MQ+MMKKM   GG+ KMMRGM+GMMP G  FPGR
Sbjct: 420 FDDMQRMMKKMK-NGGLAKMMRGMKGMMPPG--FPGR 453