Pairwise Alignments

Query, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., signal recognition particle protein from Magnetospirillum magneticum AMB-1

 Score =  467 bits (1202), Expect = e-136
 Identities = 242/454 (53%), Positives = 325/454 (71%), Gaps = 2/454 (0%)

Query: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
           MFE+L+ RL +  + ++GRG L+E +V + LREVR+ALLEADVAL VV+EF+  VK RAV
Sbjct: 1   MFESLSSRLGKVFEKLTGRGALSEADVTDALREVRVALLEADVALSVVKEFIGRVKARAV 60

Query: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120
           G EV KS+SPGQ  +KIV  EL  ++G     L+L+  PP V++M GLQG+GKTT+ AK+
Sbjct: 61  GAEVIKSVSPGQMVVKIVHDELIATLGTKGTELNLSAVPPVVILMVGLQGSGKTTTSAKI 120

Query: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180
              L+ + KK VL+ S DVYRPAA +QL+ LA + +V   P  + + P+ I+K A+   +
Sbjct: 121 ALKLK-KEKKKVLLASLDVYRPAAQQQLQILAGQAEVGSLPIVMGEMPVAISKRALDVGR 179

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240
            +  DVVILDTAGRLH+D+ +M E+ A+  A KP ETL V DAM GQDA   A+ FNE +
Sbjct: 180 KEGYDVVILDTAGRLHIDQELMAEVAAVRDAAKPTETLLVTDAMVGQDAVTLAREFNEKV 239

Query: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300
            +TG++LT++DGDARGGAALS+R ITG+PIKFLG GEK DALE FHPDRIA RILGMGDV
Sbjct: 240 GVTGIVLTRIDGDARGGAALSMRAITGRPIKFLGAGEKLDALEVFHPDRIAGRILGMGDV 299

Query: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360
           + L+E+    +D+E+A +LA ++++ G FDL+D R+Q  Q++ MG +  ++  LPG+G++
Sbjct: 300 VGLVEKAMETLDQEEAERLAKRMEK-GKFDLDDMRKQFAQVRKMGDLKGILGMLPGIGKM 358

Query: 361 PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLLKQ 420
                    D KM  + EAII SMT  ER+NPDLIK SRK+RIAAG+G E+QDVN+LLKQ
Sbjct: 359 AGALKDANIDNKMVARQEAIITSMTKAERRNPDLIKASRKKRIAAGAGVEVQDVNKLLKQ 418

Query: 421 FTQMQKMMKKMSAKGGMQKMMRGMRGMMPGGMKF 454
           + QM  MMKK+   G    M  G+ G++P GMKF
Sbjct: 419 YQQMADMMKKVGKLGQKGLMRHGIGGLLPPGMKF 452