Pairwise Alignments

Query, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 466 a.a., signal recognition particle subunit FFH/SRP54 (srp54) from Kangiella aquimarina DSM 16071

 Score =  642 bits (1656), Expect = 0.0
 Identities = 324/451 (71%), Positives = 381/451 (84%)

Query: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60
           MF++L+DRLS  LK + G+G+++E+N+K+TLREVRMALLEADVALPVV+ F+ +VKERA+
Sbjct: 1   MFDSLSDRLSGALKTLKGKGKISEDNIKDTLREVRMALLEADVALPVVKAFIGDVKERAM 60

Query: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120
           G EV K+L PGQAFIKIV  EL K+MGEAN AL+L+ +PP V++MAGLQGAGKTTS  KL
Sbjct: 61  GAEVGKALDPGQAFIKIVNDELIKAMGEANDALNLSAKPPVVILMAGLQGAGKTTSAGKL 120

Query: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180
             LL+TR KKSV+V SADVYRPAAIKQLET+A EV   FFPS   QKPIDIA  AI  AK
Sbjct: 121 AHLLKTREKKSVMVASADVYRPAAIKQLETVAGEVGATFFPSSTEQKPIDIANNAIKEAK 180

Query: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240
            +FIDVVI+DTAGRL +D  MM+EIK+LHAA++P ETLFVVD+MTGQDAANTAKAFN+AL
Sbjct: 181 KQFIDVVIIDTAGRLAIDAVMMEEIKSLHAAIEPTETLFVVDSMTGQDAANTAKAFNDAL 240

Query: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300
           PLTGVILTK DGDARGGAALSIRHITGKPIKF+G+GEK D LEPFHP+R+ASRILGMGDV
Sbjct: 241 PLTGVILTKADGDARGGAALSIRHITGKPIKFIGMGEKIDQLEPFHPERVASRILGMGDV 300

Query: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360
           LSLIEEVER VDK+KA K+A K+ +G  FDL DFR+QL QM NMGGM  +++KLPG+GQ+
Sbjct: 301 LSLIEEVERKVDKKKAEKVAKKIMKGKGFDLGDFRDQLLQMNNMGGMAGLMDKLPGMGQI 360

Query: 361 PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLLKQ 420
           P  A  +  + KMT +M A+INSMT KER  P+LIKGSRK+RIA GSGT+IQDVNRLLKQ
Sbjct: 361 PEAAKQKAMNNKMTDRMIAMINSMTPKERARPELIKGSRKKRIANGSGTQIQDVNRLLKQ 420

Query: 421 FTQMQKMMKKMSAKGGMQKMMRGMRGMMPGG 451
           F QMQKMMKK+   GGM KMMRGM+GMMP G
Sbjct: 421 FNQMQKMMKKLKGPGGMMKMMRGMKGMMPPG 451