Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 442 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  156 bits (395), Expect = 1e-42
 Identities = 116/429 (27%), Positives = 212/429 (49%), Gaps = 23/429 (5%)

Query: 10  LIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIG 69
           ++ +LVL+L +A  + +E ++++    RL+ LA  G+KGA  A++L E P R +  + IG
Sbjct: 6   ILIVLVLVLINAVLAAAELSIVSSRPARLKTLADRGNKGAKAAIRLAEDPGRFLSTVQIG 65

Query: 70  NNLVNILA-----ASIATIIGMRL---------WGDLGVAIASGVLTLVVLVFGEVTPKT 115
             L+ ILA     AS+  ++G  L            LG  +    +T V LV GE+ PK 
Sbjct: 66  ITLIGILAGAFSGASLGDLLGETLREAGLPTGVAHPLGYTMVVVAITYVSLVIGELIPKR 125

Query: 116 IAALNPERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRT 175
           +A  N E +A   + L+I LSK+ A +V  ++  T  +L L+G +  S + +++ EE+R 
Sbjct: 126 LALQNAEPLACMVAPLMIGLSKVSAPMVWLLDASTRAVLTLLG-RGGSRASSVTDEEIRA 184

Query: 176 VVHEA--GALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSP 233
           ++ EA    +I    + M+  ++ L    V  IM PR D+  ++++ D + +   ++ +P
Sbjct: 185 IITEAETAGVIDPAERRMISGVMRLADRPVTAIMTPRPDVEWVDISKDAEEVRHVLLTTP 244

Query: 234 HTRVLVYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANF 293
           H+R+     + ++ +G I  +  L    K +  +    + V+ + FI E       +   
Sbjct: 245 HSRLPACDGSPEETIGVIQAKRVLDAYLKGE--RPDPRQYVQTVPFIVENVGALEAMRVL 302

Query: 294 QHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSML---ATPSEDINVQQDGSYLVN 350
           +  +  + +VVDEYGD+ G+VT  D+L  I G          A    ++  + DGSYLV 
Sbjct: 303 RGAEVPMAIVVDEYGDMAGVVTGYDLLLAITGSVEAGHQPGDAHVERNVVERHDGSYLVA 362

Query: 351 ASITIRDLNKEMKWDFPTD-GPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMV 409
               + +L   +    PTD G  T+ G  L +L+++P E       G+  E++++    +
Sbjct: 363 GDTPVDELRDLLDVALPTDEGFHTVAGFALSHLKELPEEGEVFTALGWRFEIVDMDGRRI 422

Query: 410 KTVRIIPQH 418
             + +   H
Sbjct: 423 DKLLVSRPH 431