Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  114 bits (286), Expect = 3e-30
 Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 20/257 (7%)

Query: 179 EAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVL 238
           E G   P   ++ML +IL L +V + DIMVPR++I A+  +     + +  +   H+R++
Sbjct: 51  EEGEFTPSE-RKMLRNILHLREVGIGDIMVPRAEIVAVRKDAPLGELLKLFVTVGHSRLV 109

Query: 239 VYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLL--------------RAVKELYFIPEGT 284
           VY DT+DD VG +H+RD +   + +  S S  +                ++ + ++P   
Sbjct: 110 VYDDTLDDPVGMVHIRDLIAFLAGDLASASGKIDLGKVNLDATLETAGLIRRILYVPPSM 169

Query: 285 PLNVQLANFQHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQD 344
           P    L + Q  +  + LV+DEYG   GLV++ED++EEIVG+            +  Q D
Sbjct: 170 PAVDLLVSMQAARTHLALVIDEYGGTDGLVSIEDVVEEIVGEIEDEHDEAAETLLTRQPD 229

Query: 345 GSYLVNASITIRDLNKEMKWDFPTDGP----KTLNGLILEYLEDIPSENTSLRL-AGYPL 399
           GSYL +A   +    + +   F ++       ++ GL++     +P     + L  G+ +
Sbjct: 230 GSYLADARTPLEAAVEVLGTGFASEEAMEEVDSVGGLVVRIASRVPKSGEVISLPGGFDV 289

Query: 400 EVIEVADNMVKTVRIIP 416
           +V+E     +K +RIIP
Sbjct: 290 DVVEADPRRLKKLRIIP 306