Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., CBS domain protein from Pseudomonas putida KT2440

 Score =  209 bits (531), Expect = 2e-58
 Identities = 135/417 (32%), Positives = 225/417 (53%), Gaps = 24/417 (5%)

Query: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60
           MD +  + L   L + +L+SA F+  E A + LN         +GH            P 
Sbjct: 1   MDTLPYAPLFGTLALALLWSALFTAVEAARLQLNG--TLRAGEDGH------------PV 46

Query: 61  RLIGLILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALN 120
                +++  +L  +L   +A ++G R  G+ G  +A    TL +LVF E  P+ +A  N
Sbjct: 47  LPAQALVLCASLGKLLVLGLACLVGQRQSGEHGFWLAGLAATLTLLVFAEYLPRRLARRN 106

Query: 121 PERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLV--GIKSISSSDALSKEELRTVVH 178
           P+  AF S  L  +L K+   ++  +  +  G  +L+    ++  ++ AL  +E      
Sbjct: 107 PQ--AFVS--LGASLLKVPLALLQPLACLLDGAAKLILRPFRAQPTAVALHTQEADDFDE 162

Query: 179 EAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVL 238
           +     P+  Q +L  +  L+K+TV DI+VPR+++  IN+++  + I  Q+I S HTR+ 
Sbjct: 163 DEQHEAPR--QGLLDGLQSLDKITVNDILVPRNEVDGINLDEPIERIVEQLIVSRHTRLP 220

Query: 239 VYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKE 298
           VY + I+     ++ +    L  K + +  +L  A  E YF+PE TPL +QL NF   + 
Sbjct: 221 VYHNDINQVEAILNTKLISHLLPKAELTLEALHSACYEPYFVPESTPLQMQLLNFHKQQR 280

Query: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITIRDL 358
           R+G+VVDEYG++ G+VTLEDILEEIVG+F     +  +  ++ Q DG+++++ + ++R++
Sbjct: 281 RLGVVVDEYGEVLGIVTLEDILEEIVGEFEDEQ-SLENPHVHPQPDGTFVIDGTASLREI 339

Query: 359 NKEMKWDFPTD-GPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTVRI 414
           N+ + W  P D GPKTLNGL+ E LE IP     L++  Y LE++E  DN    V +
Sbjct: 340 NRTLSWHLPCDGGPKTLNGLVTEALESIPESAVCLKIGRYRLEILETEDNCASKVLV 396