Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 429 a.a., HlyC/CorC family transporter from Serratia liquefaciens MT49

 Score =  500 bits (1287), Expect = e-146
 Identities = 248/418 (59%), Positives = 332/418 (79%), Gaps = 2/418 (0%)

Query: 1   MDAISTSALLIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPD 60
           M+ +ST  L+I L+V+I+ SAYFS SET MMTLNRYRLRHL+  G++ A R  KLL++PD
Sbjct: 1   MEHVSTGTLIIILVVMIVVSAYFSASETGMMTLNRYRLRHLSKQGNRSARRVEKLLQKPD 60

Query: 61  RLIGLILIGNNLVNILAASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAALN 120
           RLIGL+LIGNNLVNILA+++ATI+GMRL+GDLGVAIA+GVLT  VL+F EV PKT AAL 
Sbjct: 61  RLIGLVLIGNNLVNILASALATIVGMRLYGDLGVAIATGVLTFAVLLFAEVLPKTFAALY 120

Query: 121 PERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIK-SISSSDALSKEELRTVVHE 179
           PERIAFPSS+LL  L K+   +V  +N ITT ILRL GI+ ++  SDA+SK+ELRT+V E
Sbjct: 121 PERIAFPSSFLLAPLQKVMFPLVWLLNGITTLILRLFGIRTNVRISDAVSKDELRTIVKE 180

Query: 180 AGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLV 239
           + + I +R+Q+ML+S+LDLEKVTV+DIMVPR++I  I+VNDD+K I RQ+  SPH R+++
Sbjct: 181 SHSQISRRNQDMLISVLDLEKVTVDDIMVPRNEIVGIDVNDDWKSIMRQLTHSPHGRIVL 240

Query: 240 YRDTIDDAVGFIHLRDALRLQS-KEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKE 298
           YR ++DDA+G + +R+A RL + K++F+K +LLRA  E+Y++PEGTPLNVQL  FQ NKE
Sbjct: 241 YRTSLDDAIGMLRVREAYRLMTEKKEFNKENLLRAADEIYYVPEGTPLNVQLVKFQRNKE 300

Query: 299 RIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASITIRDL 358
           ++G+VVDEYGDIQGLVT+EDILEEIVGDFTTSM  T +E++N Q DGS L++ +  +R+L
Sbjct: 301 KVGIVVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGTANVREL 360

Query: 359 NKEMKWDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTVRIIP 416
           NK   W  P    +T+NG++LE LE+IP   T +R+  Y + +++V DNM+K VR+ P
Sbjct: 361 NKAFNWTLPATDARTINGMLLEELEEIPEVGTRVRIGHYDISILDVQDNMIKQVRVTP 418