Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 438 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (289), Expect = 2e-30
 Identities = 97/414 (23%), Positives = 192/414 (46%), Gaps = 25/414 (6%)

Query: 10  LIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIG 69
           ++ +L LI  S +FS SE A+    + RLR LA  G   A + L L   P     ++ IG
Sbjct: 7   VMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLHLQSYPGSFFTVVQIG 66

Query: 70  NNLVNILAASIATIIG-------MRLW------GDLGVAIASGVLTLVVLVFGEVTPKTI 116
            N V I+   +            +  W        +   ++  ++T   ++  ++ PK I
Sbjct: 67  LNAVAIMGGIVGESAFRPYFYQFLSSWLADPWLSQVSFLMSFLLVTSAFILVADLMPKRI 126

Query: 117 AALNPERIAFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTV 176
           A   PE++A      +     +   +V   N + +GI +L+ I + + +D ++ +++  V
Sbjct: 127 AMAMPEQVALAVVGPMSVCIAVLRPLVWFFNGMASGIFKLLQIPT-ARNDEITSDDIYAV 185

Query: 177 VH---EAGALIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSP 233
           ++   EAG L  +  Q+M+ ++ +++ V+V   M  R  +    + D  + I R++ + P
Sbjct: 186 MNAGAEAGVL-DKGEQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIAEDP 244

Query: 234 HTRVLVYRDTIDDAVGFIHLRDAL-RLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLAN 292
           HT+ LV    +D   GF+  ++ L R+ + E  +       V     IP+   L+  +  
Sbjct: 245 HTKFLVCDGQLDMVKGFVDAKELLIRVINGENITLKD-TSLVHTSLIIPDTLSLSEAMEY 303

Query: 293 FQHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNAS 352
           F++++    +V++EY  + G+VT  D+   ++G ++   L    E I  +   S+LV+  
Sbjct: 304 FKNSRADFAVVMNEYALVVGIVTTNDLQRAVMGAWS---LHESEEQIIARDSNSWLVDGV 360

Query: 353 ITIRDLNKEMK-WDFP-TDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEV 404
             I D+ +     +FP +   +T+ G ++  L  IP     +   GY  EV+++
Sbjct: 361 TPITDVMRAFGIEEFPHSQNYETIAGFMMYMLRKIPKRTDFVNYGGYKFEVVDI 414