Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 447 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  151 bits (382), Expect = 3e-41
 Identities = 106/418 (25%), Positives = 212/418 (50%), Gaps = 33/418 (7%)

Query: 10  LIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIG 69
           ++ +L LI  SA+FS SE ++    + +L+ LA  G+  A R L + E P     ++ IG
Sbjct: 5   ILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIG 64

Query: 70  NNLVNILAASI-------------ATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTI 116
            N V IL   +             +  +   L   L   ++  ++T + ++F ++TPK I
Sbjct: 65  LNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRI 124

Query: 117 AALNPERIAFPSSYLLIALSKIFAYVVTSVNFITTG----ILRLVGIKSISSSDALSKEE 172
             + PE +A      +I   +   YV T + +   G    I R+  +  +   D ++ ++
Sbjct: 125 GMIAPEAVALR----IINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDD-ITSDD 179

Query: 173 LRTVVHEAGAL---IPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQV 229
           +  VV EAGAL   + ++  E++ ++ +LE  TV   M PR ++   ++++D + +  +V
Sbjct: 180 IYAVV-EAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKV 238

Query: 230 IQSPHTRVLVYRDTIDDAVGFIHLRDAL-RLQSKEQFSKSSLLRAVKELYFIPEGTPLNV 288
            + PH++ LV  + ID  +G++  +D L R+ + +  + +S ++ ++    +P+   L+ 
Sbjct: 239 AEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQ-IRNTLIVPDTLTLSE 297

Query: 289 QLANFQHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYL 348
            L +F+   E   ++++EY  + G++TL D++  ++GD     L    E I  + + S+L
Sbjct: 298 ALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGL---EEQIVARDENSWL 354

Query: 349 VNASITIRDLNKEMKWD-FPTDGP-KTLNGLILEYLEDIPSENTSLRLAGYPLEVIEV 404
           ++    I D+ + +  D FP  G  +T+ G ++  L  IP    S++ AGY  EV+++
Sbjct: 355 IDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDI 412