Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 527 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  110 bits (275), Expect = 1e-28
 Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 12/273 (4%)

Query: 150 TTGILRLV-GIKSISSSDALSKEELRTVVHEAGALIPQRHQEMLLSILDLEKVTVEDIMV 208
           T  ++RL+ G K  +  DA +   L  V H    +   + + M+  +L+L + TV  IM 
Sbjct: 250 TEAVMRLLSGQKEDAELDAETASML--VDHGNQQIFNPQERRMIERVLNLNQRTVSSIMT 307

Query: 209 PRSDIYAINVNDDFKFINRQVIQSPHTRVLVYR-DTIDDAVGFIHLRDALRLQSKEQFSK 267
            R DI  I++N   + I + + ++ HTR++V   D  +D +G +H+ D L  Q   +   
Sbjct: 308 SRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLL--QQSLRGEP 365

Query: 268 SSLLRAVKELYFIPEGTPLNVQLANFQHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDF 327
            +L   +++    PE  PL   L  F++ +     VVDE+G ++G+VTL D+ E I G+ 
Sbjct: 366 LNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNL 425

Query: 328 TTSMLATPS-EDINVQQDGSYLVNASITIRDLNKEMKWDFPTDGPK---TLNGLILEYLE 383
              +    +  DI    DGS+  N  + + DL + +    P D  +   T+ GL++EYL+
Sbjct: 426 PNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYV--PLPLDEKREYHTIAGLLMEYLQ 483

Query: 384 DIPSENTSLRLAGYPLEVIEVADNMVKTVRIIP 416
            IP     +++  Y L+ ++V  + V+ V+IIP
Sbjct: 484 RIPKPGEEVQVGDYLLKTLQVESHRVQKVQIIP 516