Pairwise Alignments

Query, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 449 a.a., gliding motility-associated protein GldE from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  171 bits (433), Expect = 4e-47
 Identities = 116/418 (27%), Positives = 215/418 (51%), Gaps = 23/418 (5%)

Query: 10  LIFLLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIG 69
           LIFL  L+L SA  SGSE A  +L+   L  L +   + +   ++L+E P RL+  ILI 
Sbjct: 27  LIFLF-LLLGSALVSGSEVAYFSLSHDDLNLLNTESDEKSALVIRLIEAPQRLLSTILIL 85

Query: 70  NNLVNILAASIATIIGMRLWGD-----LGVAIASGVLTLVVLVFGEVTPKTIAALNPERI 124
           NN++NI   ++ T   + L+G      + V I +  +T  ++ FGE+ PK  A  N  R+
Sbjct: 86  NNMINIGIVTLTTFFTLTLFGSNATGIVVVLIQTVGITFAIVFFGEIVPKVYA--NNARV 143

Query: 125 AFPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTVVHEAGALI 184
            F  S L+      F+ ++  ++     I  ++  +       LS  EL   +       
Sbjct: 144 TF--SKLMAKTLNFFSIILAPLSSFLMAISNIIERRIERKGYTLSVNELHQALEITSENT 201

Query: 185 PQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTRVLVYRDTI 244
            +  +++   I++   ++V+ +M  R DI A++V  DF  +  ++ +S ++R+ VYR+TI
Sbjct: 202 TEGEKDIFKGIVNFGTLSVKQVMCSRMDITAVDVEMDFHELMDKINKSGYSRIPVYRETI 261

Query: 245 DDAVGFIHLRDAL-RLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHNKERIGLV 303
           D+  G ++++D L  ++  E F   +L R   + +F+PE   ++  L +FQ+ +  + +V
Sbjct: 262 DNIEGILYIKDLLTHIEKDEDFQWQTLTR---KGFFVPENKKVDALLKDFQNKRVHMAIV 318

Query: 304 VDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQ--DGSYLVNASITIRDLNKE 361
           VDEYG   GLVTLED++EEI+G+          +DI  +Q  D +++    +++ D  K+
Sbjct: 319 VDEYGGTSGLVTLEDLIEEIIGEINDEF--DDDDDIFYKQIDDSTFVFEGKVSLNDFCKK 376

Query: 362 MK-----WDFPTDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEVADNMVKTVRI 414
           ++     +D      ++L GL+LE     P+  T ++   +   ++ V    +K V++
Sbjct: 377 LELDSQIFDEVKGDSESLGGLLLELNAKFPNTGTKIQFEYFTFTIMAVDARRIKKVKV 434