Pairwise Alignments

Query, 245 a.a., pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (312), Expect = 1e-33
 Identities = 77/231 (33%), Positives = 121/231 (52%), Gaps = 5/231 (2%)

Query: 8   VNIDHIATLRQARGTSYPDPVHAAAVAEHAGADGITIHLREDRRHIIDRDVYLLAKTLKT 67
           VN++ +A +R  R    P    AA +   AGA GIT+H R D RHI  +DV+ LA  LK 
Sbjct: 1   VNLNKVALVRNTRHLGIPSVTRAATLCLQAGARGITVHPRPDERHIRAQDVHDLADLLKA 60

Query: 68  ----RMNFECAVTEEMLNIACEVKPTYVCLVPEKRQEVTTEGGLDVAGQLDKITAAVSRL 123
                 N E      ++    E++P  V  VP+   + T++ G       +++   ++  
Sbjct: 61  WPDREFNIEGNPFHNLMGFVRELRPQQVTFVPDSEGQFTSDHGWSFPADAERLRPLIAEA 120

Query: 124 AANGIQVSLFIDADKTQIDAAVASGAPLIEIHTGCYADAKTADEEAKELERIREMAKYAH 183
            A G++VSLF+DA+  Q+  A A GA  +E++T  YA A    +   +L+R R  A+ A 
Sbjct: 121 HALGVRVSLFMDAEPDQMAGAKAVGADRVELYTEPYAAAWHTPQRDAQLQRFRVAAQAAL 180

Query: 184 GKGLIVNAGHGLHYHNVKP-IAAIPELYELNIGHAIVARAAIDGLATAVKD 233
             GL VNAGH L+  N+   + A+  + E++IGHA++A A   G +  + D
Sbjct: 181 DAGLGVNAGHDLNRENLTAFLRAVRGVSEVSIGHALIADALELGYSATIAD 231