Pairwise Alignments

Query, 339 a.a., GTP-binding protein Era (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., GTPase Era from Pseudomonas putida KT2440

 Score =  342 bits (876), Expect = 9e-99
 Identities = 167/296 (56%), Positives = 226/296 (76%), Gaps = 3/296 (1%)

Query: 43  TYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPG 102
           T CG VAI+GRPNVGKSTLLN +LGQK++ITS+KPQTTRH ++GI T+G  Q +++DTPG
Sbjct: 9   TRCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPG 68

Query: 103 LHIEEQRAINRLMNRAAASSLADVSMVIFVVDGMTWTADDEMVLSKLRRGGEERKTVLAI 162
           +H    +A+NR MNR A+++L DV +VIFVVD   WT +D++VL +++        ++A+
Sbjct: 69  MHKANDKALNRYMNRNASAALKDVDVVIFVVDRTKWTDEDQLVLERVQY--VTGPLIIAV 126

Query: 163 NKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFFPED 222
           NK D +++K  L P+L+ + ++ P  E++PISA +G N+  +    A+ LPEN  FFPED
Sbjct: 127 NKTDRMEEKAELIPHLQWLQEQLPNAEVMPISAQQGHNLDALEAQIAKHLPENDHFFPED 186

Query: 223 YVTDRSQRFMASEIVREKLMRFLGDELPYDATVEIEQFKMMENGVYQINALILVEREGQK 282
            +TDRS RF+A+E+VREK+MR LG ELPY  TVEIE+FK  +  V  I+ALILVER+GQK
Sbjct: 187 QITDRSSRFLAAELVREKIMRQLGAELPYQITVEIEEFK-QQGHVLHIHALILVERDGQK 245

Query: 283 RMVIGSKGERIRTIATQARLDMETLFDNKVFLEVWVKVKSGWADDERALRSLGYGD 338
           +++IG KGERI+ I ++AR DME LFD+KV L +WVKVK GW+DDERALRSLGYGD
Sbjct: 246 KIIIGDKGERIKRIGSEARKDMEVLFDSKVMLNLWVKVKGGWSDDERALRSLGYGD 301