Pairwise Alignments

Query, 339 a.a., GTP-binding protein Era (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 313 a.a., GTP-binding protein, Era family from Agrobacterium fabrum C58

 Score =  195 bits (496), Expect = 1e-54
 Identities = 108/294 (36%), Positives = 173/294 (58%), Gaps = 5/294 (1%)

Query: 43  TYCGMVAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPG 102
           T  G VA+IG  N GKSTL+NRL+G K+SI S K QTTR  + GI      QIVF+DTPG
Sbjct: 18  TRSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPG 77

Query: 103 LHIEEQRAINRLMNRAAASSLADVSMVIFVVDGMTWTADD-EMVLSKLRRGGEERKTVLA 161
           +  + +R ++R M  +A     D  +++ ++D       D E +L  L+     +K +L 
Sbjct: 78  I-FKPRRRLDRAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGLK--DVPQKKILC 134

Query: 162 INKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFFPE 221
           +NK+D +K +E L        +K  FD    ISA+ G+  + +++   ++LPE P+++PE
Sbjct: 135 LNKIDQVK-REDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETLPEGPWYYPE 193

Query: 222 DYVTDRSQRFMASEIVREKLMRFLGDELPYDATVEIEQFKMMENGVYQINALILVEREGQ 281
           D ++D   R +A+EI REKL   L  ELPY + VE E+++  ++G  +I  +I VER+ Q
Sbjct: 194 DQISDLPMRQLAAEITREKLFLRLHQELPYASHVETEKWEERKDGSVRIEQVIYVERDSQ 253

Query: 282 KRMVIGSKGERIRTIATQARLDMETLFDNKVFLEVWVKVKSGWADDERALRSLG 335
           K++ +G  G+ I+ I+T +R ++  + +  V L ++VKV+  W DD    R +G
Sbjct: 254 KKIALGKNGDAIKAISTASRKELSEILEQPVHLFLFVKVRENWGDDPERFREMG 307