Pairwise Alignments

Query, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 472 a.a., Glutamate synthase [NADPH] small chain from Pseudomonas sp. S08-1

 Score =  652 bits (1681), Expect = 0.0
 Identities = 310/467 (66%), Positives = 375/467 (80%), Gaps = 1/467 (0%)

Query: 1   MSNDFQFIEVGRKDPTKHPAAKRSTQFIEIYQPFAQAQVSEQADRCLDCGNPYCEWKCPL 60
           ++NDFQFIEVGRKDP K    +R  +F+EIY+PF  AQ ++QA RCL CGNPYCEWKCP+
Sbjct: 5   LNNDFQFIEVGRKDPKKKLLRQRKKEFVEIYEPFKPAQAADQAHRCLGCGNPYCEWKCPV 64

Query: 61  HNYIPNWLKLAQQGRIMEAADLVHETNTLPEICGRVCPQDRLCEGACTLNADFGAVTIGN 120
           HN+IPNWLKL  +G I+ AA+L H+TNTLPE+CGRVCPQDRLCEGACTLN  FGAVTIG+
Sbjct: 65  HNFIPNWLKLVSEGNILAAAELSHQTNTLPEVCGRVCPQDRLCEGACTLNDGFGAVTIGS 124

Query: 121 VEKYITDTAIAQGWRPDMSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQI 180
           VEKYITDTA A GWRPDMSKV P  ++VA++GAGPAGLGCAD+L RNGV  VVFDK P+I
Sbjct: 125 VEKYITDTAFAMGWRPDMSKVKPTGKRVAVIGAGPAGLGCADVLVRNGVTPVVFDKNPEI 184

Query: 181 GGLLTYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGT 240
           GGLLT+GIP FKL+K VM+ RR V  GMGIEF+L   +G D+   QLL+EYDAVF+GMGT
Sbjct: 185 GGLLTFGIPEFKLEKTVMSRRREVFTGMGIEFRLNTEIGVDITMQQLLDEYDAVFMGMGT 244

Query: 241 YTAMKAGLEGEDAQGVYQALPYLIGNTHHLMGSTSPDMPYLNLAGKRVVVLGGGDTAMDC 300
           YT MK G  GED  GV  AL +LI N +  +G       ++++ GKRVVVLGGGDTAMDC
Sbjct: 245 YTYMKGGFPGEDLPGVTDALDFLIANVNRNLGFEKSPEDFIDMKGKRVVVLGGGDTAMDC 304

Query: 301 VRTAVRQGASSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQPVAIKTQDGKVLGVE 360
            RT++RQGA +V CAYRRDE NMPGSR+EV+NA+EEGV FLFNRQP+AI  +D KV GV+
Sbjct: 305 NRTSIRQGAKAVTCAYRRDEENMPGSRKEVKNAKEEGVKFLFNRQPIAIVGED-KVEGVK 363

Query: 361 CVETQMGKADASGRQRAEAIVGSEQLLEADAVIIAFGFQPSPAPWFADYGIELDQWGRVK 420
            VET++G+ DA GR+  E I GSE+++ A+AV+IAFGF+PSPA WF+D+ I+ D  GRV 
Sbjct: 364 VVETRLGEPDARGRRSPEPIPGSEEIIPAEAVLIAFGFRPSPAAWFSDFKIDTDSQGRVV 423

Query: 421 ASKQADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILNYL 467
           A +Q     QT+NPK+FAGGDMVRGSDLVVTAI EGR+AA+GIL+YL
Sbjct: 424 APEQNQFKHQTSNPKIFAGGDMVRGSDLVVTAIFEGRNAAEGILDYL 470