Pairwise Alignments

Query, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 639 a.a., formate-dependent uric acid utilization protein YgfT from Escherichia coli ECRC98

 Score =  520 bits (1339), Expect = e-152
 Identities = 259/460 (56%), Positives = 328/460 (71%), Gaps = 3/460 (0%)

Query: 12  RKDPTKHPAAKRSTQFIEIYQPFAQAQVSEQADRCLDCGNPY-CEWKCPLHNYIPNWLKL 70
           RK   K  A++R   F EIY      Q + ++DRC+ C     C W CPLHN IP++++L
Sbjct: 176 RKGADKISASERKNHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRL 235

Query: 71  AQQGRIMEAADLVHETNTLPEICGRVCPQDRLCEGACTLNADFGAVTIGNVEKYITDTAI 130
            Q+G+I+EAA+L H+T++LPEICGRVCPQDRLCEGACTL    GAV+IGN+E+YITDTA+
Sbjct: 236 VQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTAL 295

Query: 131 AQGWRPDMSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQIGGLLTYGIPA 190
           A GWRPD+SKV PR EKVA++GAGPAGLGCADILAR GV+  VFD++P+IGG+LT+GIP 
Sbjct: 296 AMGWRPDVSKVVPRIEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPP 355

Query: 191 FKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGTYTAMKAGLEG 250
           FKLDK V++ RR +   MGI+F L   +G+D+ F+ L  EYDAVF+G+GTY  M+A L  
Sbjct: 356 FKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPH 415

Query: 251 EDAQGVYQALPYLIGNTHHLMG-STSPDMPYLNLAGKRVVVLGGGDTAMDCVRTAVRQGA 309
           EDA GV QALP+L  +T  LMG   S + P  ++ GKRVVVLGGGDT MDC+RT++R  A
Sbjct: 416 EDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNA 475

Query: 310 SSVICAYRRDEANMPGSRREVQNAREEGVNFLFNRQPVAIK-TQDGKVLGVECVETQMGK 368
           +SV CAYRRDE +MPGSR+EV NAREEGV F FN QP  I   +DG++  V  + T MG+
Sbjct: 476 ASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGE 535

Query: 369 ADASGRQRAEAIVGSEQLLEADAVIIAFGFQPSPAPWFADYGIELDQWGRVKASKQADNP 428
               GR+R   + GSE  L AD +I+AFGFQ    PW    GI+LD+WG ++       P
Sbjct: 536 PGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKLDKWGLIQTGDVGYLP 595

Query: 429 FQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILNYLD 468
            QT   KVFAGGD V G+DLVVTA+A GR AA+ +L   D
Sbjct: 596 TQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFD 635