Pairwise Alignments

Query, 329 a.a., CobD-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., cobalamin biosynthesis protein from Agrobacterium fabrum C58

 Score = 63.2 bits (152), Expect = 9e-15
 Identities = 69/286 (24%), Positives = 109/286 (38%), Gaps = 36/286 (12%)

Query: 20  FLVLFFALLLARLAPLP-----REMQPLIWFSHLAKQLAAKVNRPGRAPSQQATAGFLAM 74
           F + F +L++ RL   P     R   P+ W   L   +  K NR   + SQ+  AG  A+
Sbjct: 3   FALAFLSLVIERLTGYPDWLFKRIGHPVTWIGSLIALMDKKWNRESASFSQRKAAGVAAL 62

Query: 75  LLLVFPFWAIITFLLELAAFPWFFEFLVLYLCL-------------SDAGFSQVADEIAK 121
           ++ V      +T +L      WF + ++L+L               +     Q  + +A 
Sbjct: 63  VVFVG-----LTVILA-----WFAQSVLLFLPFGLLAVAIFGASLPAQQSLEQHVEAVAT 112

Query: 122 ALNREDNASAKKLLQPWVVRDTDNLSEVGLTKATIEKLATAPIYGTASTIFFFAIAGAPM 181
           AL RE     +K +   V RD   L E  + +A IE LA     G  +  F+    G P 
Sbjct: 113 ALEREGVEGGRKAVSMIVGRDPQKLDEAAICRAAIESLAENFSDGIVAPAFWLGFLGLPG 172

Query: 182 VLAVRMIKQLELSWPPIQPKYQYFCRTVHTLSTALLAIPAWLWSLSIAI-------QGGP 234
             A + I   +       P+++ F      L   L+ +PA   S S+ +          P
Sbjct: 173 GAAYKAINTADSMIGHRSPRHEAFGWASARLDD-LVNLPASRLSGSLFVVAAFFVEGASP 231

Query: 235 KALALLFRTSKNHPALRGYVMSVSLVANILRIELGGPQKFSGQRID 280
           KA     R    H          + +A  L   L GP+ + GQ I+
Sbjct: 232 KAAIAAIRRDARHHRSPNAGWPEAALAGALGFALAGPRSYGGQMIE 277