Pairwise Alignments

Query, 1007 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 891 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  207 bits (528), Expect = 2e-57
 Identities = 229/925 (24%), Positives = 390/925 (42%), Gaps = 141/925 (15%)

Query: 7   TLAIQASMFGIVPSVAWAAEPIEVKAVKENATRNETETADKNDGIEKVTVTGSRIKRDSF 66
           T   +A  F ++  V+ +  PI + A        E    D N  +E++ VTGSRI+R   
Sbjct: 5   TTVARAVRFSLLALVSTSIAPIAMAA--------EQGAVDANK-VERIAVTGSRIQRTDM 55

Query: 67  SLSTPLQGLDAKDIADSGIGSLADIL----VDQIPALAEGVSSTNSQSSVQNTGLSTIDL 122
             S+P+  +   +I  SG  +++D +     +   +  E     + QSS      ST+ +
Sbjct: 56  ETSSPVTVISRAEIDASGTATVSDFVRNLSQNSFGSFREASGFGSGQSSQ-----STVSM 110

Query: 123 RNLGTDRTLTLIDGRRVVSN-SYSGNYVSLSTIPAAMVDKVEIITGGASAVYGSDAIAGV 181
           R LG+ RTL LIDGRR+ S+ ++ G   +L+ +P A ++++E++  GASAVYGSDA+AGV
Sbjct: 111 RGLGSQRTLVLIDGRRMGSSVAFGGGTQNLNVVPMAAIERIEVLRDGASAVYGSDAVAGV 170

Query: 182 VNIITQQNKTGFEINARGGETTEGGGRETTVDAGYGADFNSDKGYIYASATYDKQHGLFA 241
           +NIIT++   G E +A  G T  GG  ++     +G   NS+K  + AS  Y  +  L+ 
Sbjct: 171 INIITKKEFEGVEFDADLGATQHGGAEKSNARFTFGV--NSEKTNMVASVEYYNRAALYD 228

Query: 242 TDRERA--LYES-------SFAYDKKQMCNTMNTADG-YQCMRDITPEDWR-ERSNDIVG 290
            DR+ +  LY +       S+    K + +      G YQ    ++  D R    N +V 
Sbjct: 229 ADRDYSDTLYSAHGWPGTGSYVDKTKPILDADGKPTGKYQ---TVSFADKRCGEGNSLVT 285

Query: 291 GRFKSNAWWYDGTELKTDFKEERDGYNGYTTGLLKVPEDTLATAVKVNYDLSESVRANAQ 350
           G         DG +  +        YN          ++  +T VKV+++L+E +    +
Sbjct: 286 GP--------DGNQTCS--------YNAAAESATMAAQERFSTFVKVDHELTEDINWTNR 329

Query: 351 VQFSRNTAFRRTDAEGQDYN--------DAELYIDPITGLPGMIDAGSILANNPYIPAEI 402
           +  SR     +  A    Y+        ++++Y+  +            L N     A+ 
Sbjct: 330 LMMSRVWTEGQYAAAPNSYSPKLRWTKENSDIYLATVNKY-----GNDYLKNQLKYDAKG 384

Query: 403 AATGGKSITWDRRFEEVGPVESDNERTTLRTWAGLQG--DLFETWTWDASVGYGQFEQRQ 460
              GG +I    R   +GP  ++ E T +     L+G  D+     W+    + + +   
Sbjct: 385 NLIGGDTINLKMRTTPLGPRVTNVEDTDINFLTALEGHSDILGGTAWNLGAQWIRSDVTT 444

Query: 461 RRSNEISIRRLRNALN---AVYAADGVTIQCASEAARAEGCVPVNIFGEGSISKEGADYI 517
            ++   +   ++  L+     Y A G      S   + +      IF  G +   G D  
Sbjct: 445 IQTGLANANMIQEFLDNGKLDYFAAGTGYVEGSNELQLQEAAHTGIF-TGRVQTYGID-- 501

Query: 518 RANPYINTDITQFNALGYISGELFELPAGGVQSAFGMEYRRDTQAVDTDKAMRGDAITFN 577
                           G  S +LFELPAG V  A G E+ R     + DK     +   N
Sbjct: 502 ----------------GGASFDLFELPAGTVPLAIGFEFMR----TEYDKTNDAGSNLGN 541

Query: 578 DVPPFEGDVTVWEAFGEANLPLLRDMSFANKLDVDVSLRLADYSQKNIDLMSSY--RTGI 635
            +    GD    ++    +          + LD+++S R  DYS    D  S++  + G+
Sbjct: 542 IIGTSGGDNIQGKSREVLSFSAETMFPIIDGLDLELSARFDDYS----DFGSTFNPKVGL 597

Query: 636 LWEPIANYALRANYSRSQRAPNITELISPPRGDYDSIRDICNGVTATSTGAGHDSCRLDP 695
            + P+ +  +RA+Y    RAP   +L +     Y   RD                C  +P
Sbjct: 598 SYRPVDSLLVRASYGTGFRAPTFDDLYATASETYLWARD-------------WTQCPGNP 644

Query: 696 GIAVAIASTGTFKAETGSKYSPNAGNENLTEETADTYTLGFTMAPAFLEGFNLAVDYYDI 755
                    G  + +  ++Y    GN++L  E + + +LG        +  +  + YYDI
Sbjct: 645 --------NGCVQEQFKAQYQ---GNDDLEPEESTSLSLGLVW--NVTDALDFELSYYDI 691

Query: 756 KVADAIGSLSNEDILAECYNSSNPYGAGNEYCQDITRD-TEGQITQVIQQELNLNDIVTR 814
           ++ + I ++S +D+L       N    G +    + RD   G+I  V+ Q++NL ++ T 
Sbjct: 692 QIDNVISTMSTQDVL-------NQERDGFDMSNVLFRDPVTGKIDYVVLQKMNLGELKTS 744

Query: 815 GIDFAMAYEWELADYGELSLNTNWTHVLEYSSSYYGADGLVA--EDYVGELTSGIFEDRG 872
           GIDF + Y  E    GE        +VL + S     DG  +  ED +G++    F  R 
Sbjct: 745 GIDFNIRYLLE-TSVGEFRFGAETNYVLSWESK----DGPYSELEDIIGDVGQPQF--RA 797

Query: 873 TLSLTWSNDDWRVRWSAKYKSAMVD 897
            LS TW+  +W     A+Y  +  D
Sbjct: 798 NLSTTWTQGEWEASLFARYTDSQED 822