Pairwise Alignments

Query, 1007 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1023 a.a., TonB-dependent receptor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  149 bits (375), Expect = 1e-39
 Identities = 253/1111 (22%), Positives = 430/1111 (38%), Gaps = 194/1111 (17%)

Query: 1    MKKKLLTLAIQASMFGIVPSVAWAAEPIEVKAVKENATRNETETADKNDGIEKVTVTGSR 60
            M+ K   +A  AS   ++ + A  A+     A  ++    E E A     +E + V GS+
Sbjct: 3    MQSKFALMAGAASAVLLISAGAALAQD----ATPQSTPAQEGEAAQ----VEDIVVVGSQ 54

Query: 61   IKRDSFSLSTPLQGLDAKDIADSGIGSLADILVDQIPALAEGV--SSTNSQSSVQNTG-L 117
            I+  S + + P+  +  ++I  +G  S  D L+  IP + + +  S+ N Q+S    G +
Sbjct: 55   IRGASTTAALPVTVVTQEEIIATGAVS-GDDLLRSIPQMGDVLFSSANNPQTSNAARGDV 113

Query: 118  STIDLRNLGTDRTLTLIDGRRVVSN------SYSGNYVSLS----TIPAAMVDKVEIITG 167
            ++++LR+LG   TL L++GRR+V +      S +G    LS     IP + ++++E++  
Sbjct: 114  NSVNLRSLGVGNTLVLLNGRRIVQHPTSQGTSDTGTVPVLSYNSNAIPVSGLERLEVLLD 173

Query: 168  GASAVYGSDAIAGVVNIITQQNKTGFEINARGGETTEGGGRETTVDAGYGADFNSDK--- 224
            GA+A+YG+DA+AGVVN + QQ+  G E+ A+ G       RE T     G DF       
Sbjct: 174  GAAAIYGADAVAGVVNTVLQQDFDGLEMKAQYGGAEGTHRREFTFGMFAGKDFERGNLSG 233

Query: 225  --GYIYASATYDKQHGLFATDRERALYESSFAYDKKQMCNTMNTADGYQCMRDITPEDWR 282
               Y   +A         A+D  R+L+ +   Y+     +  ++   +   +  TP   R
Sbjct: 234  FLDYTNRTAQQASDEPYTASDDRRSLFANVPGYENSTDTDGRSSYTAWANFQ--TPFQVR 291

Query: 283  ERSNDIV--GGRFKSNAWWYDGTEL---KTDFKEERDGYNG--------YTTGLLKVPE- 328
              +  +    G F +    +  T               Y+G           G  + P+ 
Sbjct: 292  RGTTALTTGAGAFHNQPSSFGCTAPVGGDVCLASGNISYSGAGRELRYDAARGTTQSPDI 351

Query: 329  DTLATAVKVNYDLSESVRANAQVQFSRNTAFRRTDAEGQDYNDAELYIDPITGLPGMIDA 388
            + L   V  +YDL   V A  ++ +          A  Q+     + ++P+      I A
Sbjct: 352  ERLNLFVSGHYDLDNGVTAFGELGY--------YTASTQNIQPPTILLNPL-----WIPA 398

Query: 389  GSILANNPYIPAEIA---------------ATGGKSITWDR-RFEEVGPVESDNERTTLR 432
             +    NP+ P   A                T G ++   R RF ++G    D +    R
Sbjct: 399  SNYW--NPFGPVTFADGTRNPNRLAGLTNVPTAGTAVKLVRYRFNDLGAQVVDVDNWQSR 456

Query: 433  TWAGLQGDLFETWTWDASVGYGQFEQRQRRSNEISIRRLRNALNAVYAADGVTIQCASEA 492
               GL+G+ +  + W++++ Y + E     SN +++  L+  L A+   D          
Sbjct: 457  FLGGLRGE-WRGFDWESALLYSEAEATD-SSNAVNLTALQANL-ALSTPDAYN------- 506

Query: 493  ARAEGCVPVNIFGEGSISKEGADYIRANPYINTDITQFNA-------LGYISGELFELPA 545
              + GCV    FG+ + S + A  I A   I TD+T+ +              ++F LP 
Sbjct: 507  PFSGGCVNDTSFGDCTPSSQAA--IDA---ITTDLTRVSKTTLALWDFKVSRPDVFTLPG 561

Query: 546  GGVQSAFGMEYRRDTQAVDTDKAMRGDAITFNDV---------------PPFEGDVTVWE 590
            G V  A G+E RR+TQ  D D  + G  +  + V               P   G   V+ 
Sbjct: 562  GPVGMALGVEARRETQRDDRDADLDGTNVFRDSVSGEISQSNIAAVSSNPDTYGKREVYS 621

Query: 591  AFGEANLPLL---RDMSFANKLDVDVSLRLADYSQKNIDLMSSYRTGILWEPIANYALRA 647
            A+ E  +P++    ++     LD  ++ R   YS  +   ++  +  + W+ +    +R 
Sbjct: 622  AYVEFAVPVVSPEMNIPLVRSLDFQLAGRYEHYS--DFGDVAKPKIAMAWDLVEGVRVRG 679

Query: 648  NYSRSQRAPNITELISPPRGDYDSIRDICNGVTATSTGAGHDSCRLDPGIAVAIASTGTF 707
            +YS   RAPN+ +                N          +D  R +  + +   +    
Sbjct: 680  SYSEGFRAPNLEQ---------------TNAAQYGRLSTNNDYIRCEADLRLGRITNFNQ 724

Query: 708  KAETGSKYSPNAGNENLTEETADTYTLGFTMAPAFLE----GFNLAVDYYDIKVADAIGS 763
             ++  S     +GN  L  E +   ++G  + P F+      F   +D + I+    +G 
Sbjct: 725  CSQPASASLLVSGNPELQPEESRNQSIGLVLQPWFIPEQFGRFTFTLDRWKIEQEKIVGL 784

Query: 764  L-SNEDILAECYNSSNPYGAGNEYCQDITRD-----------TEGQITQVIQQELNLNDI 811
            L +  +++ +  N  N     N     +T D             GQI  V  Q +NL   
Sbjct: 785  LGAQSNVVLDYLNILNGTRNDNVNRAAVTADDIAFFQGSGITPVGQIVSVEDQFINLLPQ 844

Query: 812  VTRGIDFAMAYEWELADYGELSLNTNWTHVLEYSSSYYG-ADGLVAEDYVGELT------ 864
               G+D  + +      +G    + N  H+ ++  S     + L A    G++       
Sbjct: 845  TVEGLDIGLQWRLRGTPWGNFRASVNAAHLTKFDRSPGPLVESLFAAREAGQINANTPLP 904

Query: 865  --------SGIFEDRGTLSLTWSNDDWRVRWSAKYKSAMVDSHDRVEEWNVLKAENQAKL 916
                    +G  E R T S TWS   W+V    +Y SA       V E   L A+     
Sbjct: 905  ISQTLLARNGRPEWRVTGSFTWSQGPWQVGAFTQYNSA-------VTETGFLSAQ----- 952

Query: 917  DAGDASAVANPETPEFLFYGSYITHDLSVSYTMDVSQAELRLYGGLRNIFDNQGPWVADG 976
              GD   V +  T     YG Y   D +       S   +RL  G RNI D Q P  + G
Sbjct: 953  --GDPWQVDSQITGN--LYGQYEFGDNAGF----ASGTTVRL--GARNITDEQPPLTSSG 1002

Query: 977  GDLIETGTGNYSSAYGGGVGRYAYLGAELKF 1007
                      Y  A     GRY Y      F
Sbjct: 1003 ----------YLGALYNPYGRYWYANISKTF 1023