Pairwise Alignments

Query, 1007 a.a., hypothetical TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 994 a.a., TonB-dependent receptor from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  301 bits (772), Expect = 1e-85
 Identities = 263/979 (26%), Positives = 431/979 (44%), Gaps = 127/979 (12%)

Query: 17  IVPSVAWAAEPIEVKAVKENATRNETETADKNDGIEKVTVTGSRIKRDSFSLSTPLQGLD 76
           ++  +   A    +    +N   +ET +++    +E V VTGSRI R  +  ++P+  + 
Sbjct: 15  VLTGITIVATATALPVAAQNRPSSETSSSEPAAELEAVVVTGSRIARQDYIANSPIVTVT 74

Query: 77  AKDIADSGIGSLADILVDQIPAL-AEGVSSTNSQSSVQNTGLSTIDLRNLGTDRTLTLID 135
            +D   +G  ++ + L++++P   A G +++NS +     G + + LR LG+ RTL L+D
Sbjct: 75  QEDFQATGSVNI-ESLINELPQFTALGNAASNSPNLA---GQANVQLRGLGSTRTLVLLD 130

Query: 136 GRRVVSNSYSGNYVSLSTIPAAMVDKVEIITGGASAVYGSDAIAGVVNIITQQNKTGFEI 195
           GRR+V ++ S + V L+ +P  ++  VE ITGGAS+ YGSDA+ GV+N +  +   GF++
Sbjct: 131 GRRIVPSNAS-SVVDLNLLPTPLIASVETITGGASSTYGSDAVGGVLNFLLDRRFEGFKL 189

Query: 196 NARGGETTEGGGRETTVDAGYGADFNSDKGYIYASATYDKQHGLFATDRERALYE----- 250
           +A+ G + +G      V    G DF   +G    SA+Y  +  +    R  +L       
Sbjct: 190 DAQYGASDQGDAEAEAVSLTLGGDFAEGRGRAVLSASYSNRASVLNASRSFSLIGGFAGT 249

Query: 251 ---SSFAYDKKQM--CNTMNTA-------DGYQCMRDITPEDWRERSNDIVGGRFKSNAW 298
               S  +D   +     +N A       D +    + T   ++   + +  G      +
Sbjct: 250 SPLGSTVFDASNLPTAAAVNAAVSGAARGDTFGFNNNGTLFTYQGARDYVSPGGIDYEGF 309

Query: 299 WYDGTELKTDFKEERDGYNGYTTGLLKVPEDTLATAVKVNYDLSESVRANAQVQFSRNTA 358
              G   +TDF      Y+      L +P+         +Y+L+E+V     V FS+  A
Sbjct: 310 RKPGPLQQTDFT-----YSTVDRNYLIIPQTRYNVYAAASYELTEAVEFYTDVLFSQYQA 364

Query: 359 FRRTDAEGQDYNDAELYIDPITGLPGMIDAGSILANNPYIPAEIAA------TGGKSITW 412
                         +L  +P T   G      I + NP+IP E+            S   
Sbjct: 365 ------------GNQLASNPGT---GPTTGFRIPSTNPFIPTELRGVLNSRPNPAGSFRL 409

Query: 413 DRRFEEVGPVESDNERTTLRTWAGLQGDL--FETWTWDASVGYGQFEQRQRRSNEISIRR 470
           D+RF E+GP   +   +  +   GL+GDL     WT+DA + YG+ +     +  +S   
Sbjct: 410 DKRFNELGPRRQNENYSVYQITTGLRGDLVGLRDWTYDAYLTYGRVDNDTNYTGYLSRSA 469

Query: 471 LRNALNAVYAADGVTIQCASEAARAEGCVPVNIFGEGSISKEGADYIRANPYINTDITQF 530
           ++  L    A+DG    C             N FG   +S     Y+   P   T   Q 
Sbjct: 470 IQRLLE---ASDGGASLCTG---------GFNPFGANPLSASCIAYVSRVPRNKTTNDQR 517

Query: 531 NALGYISGELFELPAGGVQSAFGMEYRRDTQAVDTD---------KAMRGDAITFNDVPP 581
                + G LF LPAG V++A G  YR        D           + G  +  N   P
Sbjct: 518 VVEANLQGGLFTLPAGEVRAAVGAAYREQNYDFSPDNLLISTFTLNGVTGPELAGNSGTP 577

Query: 582 FEGDVTVWEAFGEANLPLLRDMSFANKLDVDVSLRLADYSQKNIDLMSSYRTGILWEPIA 641
             G  TV E + E  +PLL D+ F  +L+ ++  R++DY    I  ++SY+  + WE I 
Sbjct: 578 LSGSDTVSELYAEVLIPLLADLPFIRQLETNLGYRVSDYD--TIGQVASYKADLSWEAID 635

Query: 642 NYALRANYSRSQRAPNITELISPPRGDYDSIRDICNGVTATSTGA---GHDSCRL----- 693
              LR    R+ RAP+I EL +     + SI     GV  +STG      D C +     
Sbjct: 636 GLRLRGGVQRAVRAPSIGELFAAQNLSFPSI-----GVPVSSTGVRQFSGDPCDIRGAYR 690

Query: 694 DPGIAVA-----IASTGTFKAETGSKYS--------PNAGNENLTEETADTYTLG----F 736
            PG A A     +       A+    Y+           GN +L EETAD++T+G     
Sbjct: 691 APGAANAGQVRSLCLAQNVPAQVIDSYTFSNSQVSGVTGGNPDLQEETADSFTVGAILQS 750

Query: 737 TMAPAFLEGFNLAVDYYDIKVADAIGSLSNEDILAECYNS---SNP-YGAGNEYCQDITR 792
            ++ A+L G + ++DYYDI +   +G++S  + L  CYN    SNP Y   N +C+  +R
Sbjct: 751 PLSSAWLSGVSGSIDYYDITIEQVVGTVSTTEQLRRCYNQDGVSNPTYDPNNVFCRLFSR 810

Query: 793 D-TEGQITQVIQQELNLNDIVTRGIDFAMAYEWELA-----DYGELSLNTNWTHVLEY-- 844
           D   GQIT   +   NL  + T+GIDF + +  +L      D+G L+LN   T +LE+  
Sbjct: 811 DPNSGQITSTFETNANLGTLKTKGIDFQIDWRLDLTDIGAPDWGALALNVTGTRLLEWER 870

Query: 845 ----SSSYYGADGLVAEDYVGELTSGIFEDRGTLSLTWSNDDWRVRWSAKYKSAMVDSHD 900
                  Y    G V+  +   L     E +   +L W+ D W +    +Y+  + + ++
Sbjct: 871 QDIPGGPYTDRKGTVSNSFGLTLP----EWKALSTLNWTQDPWTLGLRWRYQGEVENFNN 926

Query: 901 RVEEWNVLKAENQAKLDAG 919
           R +   V+ A +   L+AG
Sbjct: 927 RSQ---VIDAIHYFDLNAG 942