Pairwise Alignments

Query, 229 a.a., aquaporin Z (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 264 a.a., Propanediol diffusion facilitator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  109 bits (272), Expect = 6e-29
 Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 29/251 (11%)

Query: 1   MSQKMAAEFLGT-LWLVLG-GCGSAVLAAAFPEVGIGLLGVSLAFGLTVLTMAFAIGHIS 58
           +  +  AEFLGT L+L  G GC SA+  A      +GL  + + +GL +    +    IS
Sbjct: 5   LKAQCGAEFLGTGLFLFFGIGCLSALKVAG---ASLGLWEICIIWGLGISLAVYLTAGIS 61

Query: 59  GCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASG-----QEGFSLAA 113
           G HLNPAV+  LW    FP  ++LPYIIAQ AG   GA + Y++ S      +    +  
Sbjct: 62  GGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVR 121

Query: 114 GFA-----SNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDE--RAPKG-FAPIAI 165
           G       ++ F  +     ++    + E+V+T   + +I+  TD+    PKG  AP+ I
Sbjct: 122 GSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKGPLAPLLI 181

Query: 166 GLCLTLIHLISIPISNTSVNPARSTGPALFV-----GDWAVS---QLWLF---WAAPIIG 214
           G+ + +I   + P++  ++NPAR  GP LF      G+ A+S   ++  F     AP+IG
Sbjct: 182 GILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIG 241

Query: 215 AILAGVIYRYF 225
           A     IYRYF
Sbjct: 242 ACAGAAIYRYF 252