Pairwise Alignments

Query, 339 a.a., aspartate carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 334 a.a., aspartate carbamoyltransferase catalytic subunit from Pseudomonas simiae WCS417

 Score =  121 bits (303), Expect = 3e-32
 Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 28/329 (8%)

Query: 8   HILSVNQLDLDSIQTIFNVAHRMMPYALRE-KRTKVLEGAILGNLFFEPSTRTRVSFGCA 66
           H LS++ L  + +  I + A   +    R  K+  +L G  + N+FFE STRTR +F  A
Sbjct: 20  HFLSLDGLPRELLTEILDTADSFLEVGGRAVKKVPLLRGKTICNVFFENSTRTRTTFELA 79

Query: 67  FNLLGGHVRETTGMASSSLSKGESLYDTARVLSTYS-DVIAMRHPDSYSVKEFAEG--SR 123
              L   V  T  +++SS SKGE+L DT R L   + D+  +RH DS +    AE    +
Sbjct: 80  AQRLSADVI-TLNVSTSSASKGETLLDTLRNLEAMAADMFVVRHGDSGAAHFIAEHVCPQ 138

Query: 124 VPVINGGDGSNEHPTQALLDLFTIQKELGHASRGIDGMHIAMVGDLKFGRTVHSLSRLLC 183
           V +INGGDG + HPTQ +LD+ TI++  G      + + +A+VGD+   R   S    L 
Sbjct: 139 VAIINGGDGRHAHPTQGMLDMLTIRRHKG----SFENLSVAIVGDILHSRVARSNMLALK 194

Query: 184 MYKNISFTLISPTELAMPDYVISDIENAGHSIKITDQLEGHLDKADILYLTRIQEER--- 240
                   +I+P  L     +   IE  G  +  TD  EG L   D++ + R+Q ER   
Sbjct: 195 ALGCPDIRVIAPKTL-----LPIGIEQYGVKV-YTDMAEG-LKDVDVVIMLRLQRERMAG 247

Query: 241 --FPSQEEANKYRGKFRLNRSIYTQHCKSNTVIMHPLPRDSRAQANELDNDLNSHPNLAI 298
              PS+ E  +  G      +      K + ++MHP P +   +  E+++ +   P   I
Sbjct: 248 GLLPSEGEFYRLFGL----TTARLAGAKPDAIVMHPGPIN---RGVEIESAVADGPQSVI 300

Query: 299 FRQADNGLLIRMALFALTLGVDSQLEKYE 327
             Q   G+ +RMA+ ++ +   +   ++E
Sbjct: 301 LNQVTYGIAVRMAVLSMAMSGQTAQRQFE 329