Pairwise Alignments

Query, 339 a.a., aspartate carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 327 a.a., aspartate carbamoyltransferase catalytic subunit from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  113 bits (283), Expect = 6e-30
 Identities = 100/319 (31%), Positives = 155/319 (48%), Gaps = 28/319 (8%)

Query: 4   FEGSHILSVNQLDLDSIQTIFNVAHRMMPYALRE-KRTKVLEGAILGNLFFEPSTRTRVS 62
           F   H L+ + LD      + ++    + +  +  K   VL G  + NLFFE STRT  S
Sbjct: 19  FPKPHFLAASDLDPYVTPQLLDLGDAFVDFNRQSSKALDVLHGRTVVNLFFENSTRTSSS 78

Query: 63  FGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTYS-DVIAMRHPDSYSVKEFAEG 121
           F  A   LG  V  T  +ASSS+ KGE+L DTA  L+    D++ +RH  S + +  ++ 
Sbjct: 79  FEIAAKRLGADV-VTMPVASSSVKKGETLIDTAVTLNAMKPDILVIRHSASGAAELLSQK 137

Query: 122 SRVPVINGGDGSNEHPTQALLDLFTIQKELGHASRGIDGMHIAMVGDLKFGRTVHSLSRL 181
               V+N GDG +EHPTQALLDL ++++  G     +  + +A+ GD+   R   S   L
Sbjct: 138 VGCAVVNAGDGRHEHPTQALLDLLSMRRAFG----DVTSLTVAICGDITHSRVARSNVAL 193

Query: 182 LCMYKNISFTLISPTELAMPDYVISDIENAGHSIKITDQLEGHLDKADILYLTRIQEERF 241
           L M       LI P     P  V  D +  G  +   D  EG L   D++ + R+Q ER 
Sbjct: 194 LQM-MGARVRLIGP-----PTLVPGDADRWGCEV-FHDMREG-LKGCDVVMMLRLQLERM 245

Query: 242 -----PSQEEANKYRGKFRLNRSIYTQHCKSNTVIMHPLPRDSRAQANELDNDLNSHPNL 296
                PS  E  ++ G  R  +  +   C     +MHP P +   +  E+D+D+    ++
Sbjct: 246 AGALVPSTREYFRFWGLDR-EKLAWANPCAR---VMHPGPMN---RGVEIDSDVADDLDV 298

Query: 297 AIFR-QADNGLLIRMALFA 314
           ++ + Q + G+  RMA+ A
Sbjct: 299 SLIQDQVEMGVAARMAVLA 317