Pairwise Alignments

Query, 428 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 435 a.a., Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) from Pseudomonas fluorescens GW456-L13

 Score =  378 bits (971), Expect = e-109
 Identities = 196/425 (46%), Positives = 264/425 (62%), Gaps = 3/425 (0%)

Query: 3   AIPHTGSYYAASANDKVERARLQESIEADVCVIGAGYTGLSAALHLLELGFSVVVLDAAR 62
           A+ HT SYYAAS+  + E   L+  + ADVCV+G G++GL+ AL L E G SVV+L+A R
Sbjct: 9   AMNHTASYYAASSLPQPELPALKGEVLADVCVVGGGFSGLNTALELAERGLSVVLLEAHR 68

Query: 63  IGWGASGRNGGQIVNSYSRDIDTIEKTVGKEQAKLFGKMAFEGGRIIRERIAKYNISCDL 122
           IGWGASGRNGGQ++      +D     +G E  +    M  E   I+R+R+  + I CDL
Sbjct: 69  IGWGASGRNGGQLIRGVGHGLDQFTNVIGVEGVRQMKLMGLEAVEIVRQRVEHFQIPCDL 128

Query: 123 KDGGVFAAMNEKQMGHLRHQKQLWESHGHMGQLELLDGKGIRSVVNTERYVGGMLDKSGG 182
             G    A   + +       +   S G+  +  LL    + +VV + RYVGG++D   G
Sbjct: 129 TWGYCDLANKPRDLEGFAEDAEELRSLGYRYETRLLQANEMHTVVGSTRYVGGLIDMGSG 188

Query: 183 HIHPLNLALGEARAVESLGGKIFEDSAVLRVDEGDNPVVHTATGSVKAKFVVVAGNAYLG 242
           H+HPLNLALGEA A + LG ++FE SAV R+D G    VH A GSV+AK +V+  NAYL 
Sbjct: 189 HLHPLNLALGEASAAQRLGVQLFEHSAVTRIDYGPEIKVHAAEGSVRAKTLVLGCNAYLN 248

Query: 243 KLMPELQAKSMPCGTQVITTEPLDEDLAASLLPQDYCVEDCNYLLDYFRLSGDKRMIYGG 302
            L PEL  K +P G+ +I TEPL E+ A +LLPQ+  V D    LDY+RLS D+R+++GG
Sbjct: 249 DLNPELSGKVLPAGSYIIATEPLSEEQAHALLPQNMAVCDQRVALDYYRLSADRRLLFGG 308

Query: 303 GVVYGARDPADIESLIIPNMLKTFPQLKGVKVDYAWTGNFLLTLSRLPQVGRI--GKNIY 360
              Y  RDP DI + + P ML+ FPQL  VK+DY W G   +  +RLPQ+GR+    N+Y
Sbjct: 309 ACHYSGRDPKDIAAYMRPKMLEVFPQLSAVKIDYQWGGMIGIGANRLPQIGRLKDQPNVY 368

Query: 361 YSQGCSGHGVTYTHLAGKLIAEMLNGQ-ATRFDAFAALPHYPFPGGHALRVPFSALGAWY 419
           Y+Q  SGHGV  THLAGKL+AE ++GQ +  FD FA +PH  FPGG  LR P  ALG  +
Sbjct: 369 YAQAYSGHGVNATHLAGKLLAEAISGQHSGGFDLFAKVPHITFPGGKHLRSPLLALGMLW 428

Query: 420 YSLRD 424
           +  ++
Sbjct: 429 HRFKE 433