Pairwise Alignments

Query, 428 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 435 a.a., hypothetical oxidoreductase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  348 bits (894), Expect = e-100
 Identities = 173/423 (40%), Positives = 260/423 (61%), Gaps = 5/423 (1%)

Query: 5   PHTGSYYAASANDKVERARLQESIEADVCVIGAGYTGLSAALHLLELGFSVVVLDAARIG 64
           PH  SYY  +A +     +L+ SI ADVC++G G++G++ A+ L + G SVV+L+A R+G
Sbjct: 13  PH--SYYLDTAKEIYAHPQLEGSITADVCIVGGGFSGINTAIELRQRGLSVVLLEAKRMG 70

Query: 65  WGASGRNGGQIVNSYSRDIDTIEKTVGKEQAKLFGKMAFEGGRIIRERIAKYNISCDLKD 124
           WGASGRNGG+++     D       +G+E      +M FE   I+R RI  + I CDL+ 
Sbjct: 71  WGASGRNGGELIRGIGHDPAQFINEIGQEGVSAIQQMGFEAVDIVRNRIQTHQIDCDLQM 130

Query: 125 GGVFAAMNEKQMGHLRHQKQLWESHGHMGQLELLDGKGIRSVVNTERYVGGMLDKSGGHI 184
           G    A+  + M  L+ + +  +S G+  +++LL    + +V+ ++ Y G ++D   GH+
Sbjct: 131 GYCDLAVKPRHMIELQEEFESLKSLGYKHEIKLLAQSQLGNVIGSDFYQGALVDMGSGHL 190

Query: 185 HPLNLALGEARAVESLGGKIFEDSAVLRVDEGDNPVVHTATGSVKAKFVVVAGNAYLG-K 243
           HPLNLALGEAR    LG ++FE SA  ++ +GD P V TA G V  +++V+AGNAY+G K
Sbjct: 191 HPLNLALGEARVARELGAQLFEYSAAEKIIQGDKPKVLTAKGEVTCQYLVLAGNAYIGHK 250

Query: 244 LMPELQAKSMPCGTQVITTEPLDEDLAASLLPQDYCVEDCNYLLDYFRLSGDKRMIYGGG 303
           L   +  K +P G+ ++ TEPL +    +++PQ+    D    LDYF LS D+R+++GG 
Sbjct: 251 LNSYIGGKVLPAGSYLLATEPLTQQQCKNIIPQNMAFADMRIALDYFHLSADRRLLFGGL 310

Query: 304 VVYGARDPADIESLIIPNMLKTFPQLKGVKVDYAWTGNFLLTLSRLPQVGRI--GKNIYY 361
             Y  +DP DIE+ + PN+ K FPQLKGV++DY W G   +  +R+PQ+GR+    NI++
Sbjct: 311 CTYSGKDPKDIEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRLPDASNIFF 370

Query: 362 SQGCSGHGVTYTHLAGKLIAEMLNGQATRFDAFAALPHYPFPGGHALRVPFSALGAWYYS 421
           +Q  +GHGV  TH+A KL+AE +  QA  FD FA + H  FPGG   R P  A G  Y+ 
Sbjct: 371 AQAYAGHGVNATHMAAKLLAEAICQQAGHFDVFAKIKHMTFPGGPTFRSPMLAAGMLYHR 430

Query: 422 LRD 424
            +D
Sbjct: 431 FKD 433