Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 294 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  360 bits (924), Expect = e-104
 Identities = 179/267 (67%), Positives = 221/267 (82%)

Query: 1   MKKLSFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAV 60
           MK+ SFSS ML  GLLF+Y PMLILVIYSFNESKLVTVWGG+S KWY  L  + Q++ +V
Sbjct: 1   MKRFSFSSFMLVAGLLFIYLPMLILVIYSFNESKLVTVWGGWSIKWYVGLLDNTQLMGSV 60

Query: 61  WTSLRIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLF 120
             SL IA Y++  AV +GT+AAFV+TR  +   +     ++TAPLVMPEVITGLSLLLLF
Sbjct: 61  ARSLEIACYTAVAAVALGTLAAFVLTRISQFKGRTLFGGLVTAPLVMPEVITGLSLLLLF 120

Query: 121 VHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTF 180
           V MA ++GWP+ERG+VT+WIAH+TFCAAYVAVVVS+RLRELD SIEEAAMDLGA P K F
Sbjct: 121 VAMAQMIGWPQERGIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKVF 180

Query: 181 FLITVPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINAL 240
           FLIT+PMI+P+L AG ++SF+LSLDDLV++SF SGPG+TTLPM VFS+VRLGV P+INA+
Sbjct: 181 FLITIPMIAPSLAAGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAV 240

Query: 241 ATLIILCVSLIAFLSWYMARRAEKRER 267
           A+LI+L VSL+ FL W+ +RRAE+  +
Sbjct: 241 ASLILLAVSLVTFLVWFFSRRAEEHRK 267