Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 259 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  180 bits (457), Expect = 2e-50
 Identities = 98/248 (39%), Positives = 156/248 (62%), Gaps = 7/248 (2%)

Query: 17  FLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAVWTSLRIAFYSSTMAVI 76
           +LY P++IL++ SFN S+    W GF+ KWY  L  +  +L A   SL +A +S+T A +
Sbjct: 17  YLYIPIIILIVNSFNSSRFGINWQGFTTKWYELLVNNDSLLQAAQHSLTMAIFSATFATL 76

Query: 77  IGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMADLLGWPKERGMV 136
           IG++ A  + R+ R   K  +S M+   ++ P+++  +SLL+LF+    LLG   + G  
Sbjct: 77  IGSLTAVALYRY-RFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM----LLGI--QLGFW 129

Query: 137 TVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTFFLITVPMISPALVAGW 196
           ++  +H TF   +V V V SRL+  D  + EAA DLGA+ +     I +P+  PA+ AGW
Sbjct: 130 SLLFSHITFSLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGW 189

Query: 197 LLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINALATLIILCVSLIAFLSW 256
           LLSF+LS+DD+V+SSF +GPG   LP+ ++S V++GVSP++NALAT++++   ++   S 
Sbjct: 190 LLSFTLSMDDVVVSSFVTGPGYEILPLKIYSMVKVGVSPEVNALATVLLVLSLVMVIASQ 249

Query: 257 YMARRAEK 264
            +AR   K
Sbjct: 250 LIARDKTK 257