Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 281 a.a., putrescine transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  352 bits (903), Expect = e-102
 Identities = 173/257 (67%), Positives = 213/257 (82%)

Query: 9   VMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAVWTSLRIAF 68
           V+L  G  FLYAPML+LVIYSFN SKLVTVW G+S +WYGEL +D  ++ AV  SL IA 
Sbjct: 14  VILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDAMMSAVGLSLTIAA 73

Query: 69  YSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLFVHMADLLG 128
            ++T A I+GT+AA V+ RF R       + MITAPLVMP+VITGLSLLLLFV +A  +G
Sbjct: 74  CAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIG 133

Query: 129 WPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTFFLITVPMI 188
           WP +RGM+T+W+AH TFC AYVAVV+SSRLRELDRSIEEAAMDLGATPLK FF+IT+PMI
Sbjct: 134 WPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMI 193

Query: 189 SPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINALATLIILCV 248
            PA+++GWLL+F+LSLDDLVI+SF SGPGATTLPM+VFSSVR+GV+P+INALATLI+  V
Sbjct: 194 MPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGAV 253

Query: 249 SLIAFLSWYMARRAEKR 265
            ++ F++WY+  RAEK+
Sbjct: 254 GIVGFIAWYLMARAEKQ 270