Pairwise Alignments

Query, 271 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 270 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  287 bits (735), Expect = 1e-82
 Identities = 145/263 (55%), Positives = 194/263 (73%), Gaps = 6/263 (2%)

Query: 1   MKKLSFSSVMLWFGLLFLYAPMLILVIYSFNESKLVTVWGGFSPKWYGELFKDQQILDAV 60
           MK+  F   +L  G  FLY P++IL+IYSFN SKLVTVWGGFS +WY  ++ +Q ++DA 
Sbjct: 1   MKRGKFDITVLTLGFAFLYIPIIILIIYSFNASKLVTVWGGFSLQWYKSMWSNQGLMDAA 60

Query: 61  WTSLRIAFYSSTMAVIIGTMAAFVMTRFKRSWAKLTLSNMITAPLVMPEVITGLSLLLLF 120
           W +LR+   S+T+  I+GT+AA  +TRF R   ++  S MI APLVMPEVITGLSLLLLF
Sbjct: 61  WVTLRVGILSATIGTILGTLAALSLTRFARFPGRVLFSGMIYAPLVMPEVITGLSLLLLF 120

Query: 121 VHMADLLGWPKERGMVTVWIAHSTFCAAYVAVVVSSRLRELDRSIEEAAMDLGATPLKTF 180
           V +        +RG  TV IAH+TF   YVA+VV SRL   DRS+EEAA+DLG  P+KTF
Sbjct: 121 VAVG------VDRGFWTVVIAHTTFTMCYVAIVVQSRLLTFDRSLEEAALDLGCPPVKTF 174

Query: 181 FLITVPMISPALVAGWLLSFSLSLDDLVISSFASGPGATTLPMVVFSSVRLGVSPKINAL 240
           F IT+P+I PA++AGW+L+F+LSLDDLVI+SFA+GPGATTLP+ ++S VRLGV+P+INA+
Sbjct: 175 FRITLPLIFPAVIAGWMLAFTLSLDDLVIASFATGPGATTLPIKIYSQVRLGVTPEINAI 234

Query: 241 ATLIILCVSLIAFLSWYMARRAE 263
            T++I  V++    +   ++R E
Sbjct: 235 CTILIGLVTIGVIAASVASKRTE 257