Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score =  405 bits (1040), Expect = e-118
 Identities = 193/288 (67%), Positives = 235/288 (81%)

Query: 11  KGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLGNY 70
           +GR   I  P+ WL LFF LPF IV KIS + A +AIPPY   + Y +D + + L+L NY
Sbjct: 16  EGRHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTYVEDKIQLVLNLANY 75

Query: 71  LMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTS 130
            +L +D LY +AYL SLKMA  ST+ CL+IG+PMAYAIA A    QTVLLLL+M+P+WT+
Sbjct: 76  GLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTA 135

Query: 131 FLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYAT 190
            LIRVYAWMGILSN G++N  L+W G+I +PLQILNTN+AVYIG++Y+YLPFMILPL+A 
Sbjct: 136 ILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFAN 195

Query: 191 LVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPD 250
           LVK D SL+EAASDLGSS  N+FWKIT PLSK+G+IAG MLVFIP VGEFVIPELLGGP+
Sbjct: 196 LVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPE 255

Query: 251 SLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLE 298
           +LMIGKVLWQEFFNNRDWPVAS+LA+VML +LI+PI LF+R QA+ +E
Sbjct: 256 TLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPILLFNRSQAKEME 303