Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 325 a.a., ABC transporter permease subunit from Paraburkholderia sabiae LMG 24235

 Score =  340 bits (873), Expect = 2e-98
 Identities = 160/287 (55%), Positives = 217/287 (75%)

Query: 12  GRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLGNYL 71
           GR   I  P+ WL +FFALPF +V KIS +   + IPPY       D V++  L L +Y 
Sbjct: 36  GRSTVIGIPFIWLTVFFALPFVLVLKISFADLRLGIPPYTELLSVKDGVVHFALQLSHYA 95

Query: 72  MLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTSF 131
            LL D LY   YLSSLKMA VSTI CL+IGYP+AY IAR+    + +L++ VMLP WTSF
Sbjct: 96  FLLQDSLYVATYLSSLKMAAVSTICCLLIGYPIAYYIARSAPATRNLLMMGVMLPFWTSF 155

Query: 132 LIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYATL 191
           LIRVYAW+GIL + G++N++L+ LG+I  P ++ +T+I VYIG++Y+YLPFM++PLYA L
Sbjct: 156 LIRVYAWIGILKDDGLLNHTLIALGLIHTPFRLYHTDIGVYIGMVYSYLPFMVMPLYAHL 215

Query: 192 VKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPDS 251
           VK+D++L+EAA DLG+     F +IT PLSK+G+IAGS+LVFIPAVGE+VIPELLGG D+
Sbjct: 216 VKMDLTLLEAAYDLGAKPWTAFTRITLPLSKNGIIAGSLLVFIPAVGEYVIPELLGGADT 275

Query: 252 LMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLE 298
           LMIG+V+W EFFN+ DWP+AS++ + M++LL++P+ +F  YQ + LE
Sbjct: 276 LMIGRVMWDEFFNDMDWPMASAVTVAMVLLLLVPMAVFQYYQVKELE 322