Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., putrescine ABC transporter permease PotH from Pectobacterium carotovorum WPP14

 Score =  394 bits (1013), Expect = e-114
 Identities = 185/287 (64%), Positives = 237/287 (82%)

Query: 12  GRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIFLHLGNYL 71
           GR   I+ PY WLLL F LPF IVFKISL+  A AIPPY     + D  L+I L+LGNYL
Sbjct: 32  GRKLVIALPYLWLLLLFMLPFLIVFKISLAEMARAIPPYTDLVSWLDGKLDISLNLGNYL 91

Query: 72  MLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTSF 131
            LLDDPLY+ AY+ SL++A VST+ CL+IGYP+A+A+A +    + +LLLLV+LPSWTSF
Sbjct: 92  HLLDDPLYFDAYMQSLQVAAVSTLCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSF 151

Query: 132 LIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYATL 191
           LIRVYAWMGIL N GI+NN L+WLG+I EPL IL+TN+AVYIG++Y+YLPFM+LP+Y  L
Sbjct: 152 LIRVYAWMGILKNNGILNNFLLWLGVIDEPLVILHTNLAVYIGVVYSYLPFMVLPIYTAL 211

Query: 192 VKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPDS 251
           ++LD SL+EA+ DLG+  + TF+ +  PL+K G+IAGSMLVFIPAVGE+VIPELLGGPDS
Sbjct: 212 MRLDYSLVEASLDLGARPLRTFFNVIVPLTKGGIIAGSMLVFIPAVGEYVIPELLGGPDS 271

Query: 252 LMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLE 298
           +MIG++LWQEFFNNRDWPVAS++A+VML+LLI+PI  FH++Q+++ E
Sbjct: 272 IMIGRILWQEFFNNRDWPVASAVAVVMLLLLIMPIIWFHKHQSKTAE 318