Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 319 a.a., putrescine ABC transporter permease PotH from Dickeya dianthicola ME23

 Score =  384 bits (986), Expect = e-111
 Identities = 177/294 (60%), Positives = 234/294 (79%)

Query: 5   SKLKWLKGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIF 64
           ++L+   GR   I+ PY WLL  F LPF IVFKIS +  A  +PPY    ++A++ L I 
Sbjct: 23  ARLRLAHGRKLVIALPYLWLLCLFMLPFLIVFKISFAEMARTVPPYTDLLEWAENRLQIS 82

Query: 65  LHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVM 124
           L++GNYL LL DPLY  AYL SL++A +ST+ CL++GYPMA+A+A +    + +LLLLV+
Sbjct: 83  LNIGNYLQLLSDPLYIDAYLQSLQVAAISTLCCLVVGYPMAWAVAHSKPSTRNILLLLVI 142

Query: 125 LPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMI 184
           LPSWTSFLIRVYAWMGIL + GI+NN L+WLG+I +PL IL+TN+AVYIG++Y+YLPFM+
Sbjct: 143 LPSWTSFLIRVYAWMGILKDNGILNNFLLWLGVIDQPLVILHTNLAVYIGVVYSYLPFMV 202

Query: 185 LPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPE 244
           LP+Y  L +LD SL+EA+ DLG+  + TF+ +  PL+K G+IAGSMLVFIP VGE+VIPE
Sbjct: 203 LPIYTALTRLDYSLVEASLDLGARPVRTFFSVIVPLTKGGIIAGSMLVFIPTVGEYVIPE 262

Query: 245 LLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSLE 298
           LLGGPDS+MIG++LWQEFFNNRDWPVAS++A+VML LLI+PI  FH++Q ++ E
Sbjct: 263 LLGGPDSIMIGRILWQEFFNNRDWPVASAVAMVMLFLLIVPIVWFHKHQNKAAE 316