Pairwise Alignments

Query, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., putrescine ABC transporter permease from Escherichia coli BL21

 Score =  399 bits (1025), Expect = e-116
 Identities = 187/293 (63%), Positives = 240/293 (81%)

Query: 5   SKLKWLKGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDVLNIF 64
           S+L+   GR   I+ PY WL+L F LPF IVFKISL   A AIPPY    ++AD  L+I 
Sbjct: 21  SQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLGEMARAIPPYTELMEWADGQLSIT 80

Query: 65  LHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVM 124
           L+LGN+L L DDPLY+ AYL SL++A +STI CL+IGYP+A+A+A +    + +LLLLV+
Sbjct: 81  LNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVI 140

Query: 125 LPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMI 184
           LPSWTSFLIRVYAWMGIL N G++NN L+WLG+I +PL IL+TN+AVYIGI+YAY+PFM+
Sbjct: 141 LPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMV 200

Query: 185 LPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPE 244
           LP+Y  L+++D SL+EAA DLG+  + TF+ +  PL+K G+IAGSMLVFIPAVGEFVIPE
Sbjct: 201 LPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPE 260

Query: 245 LLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLVLLIIPITLFHRYQARSL 297
           LLGGPDS+MIG+VLWQEFFNNRDWPVAS++AI+ML+LLI+PI  FH++Q +S+
Sbjct: 261 LLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSV 313