Pairwise Alignments

Query, 182 a.a., transcriptional regulator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 175 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 77.4 bits (189), Expect = 1e-19
 Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 5/168 (2%)

Query: 7   LRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIPMSLVDFFSIEA 66
           L+ +RK  G++   LA+++G+T S +S +E+   +PS+++  K+   + + + + FS E 
Sbjct: 5   LKLLRKKLGVTLEALAEKSGMTKSYLSKVERGLNTPSIAAALKLAKALNVKVEELFS-ED 63

Query: 67  SSECEQKVVYRSDELLNIGTGPLEFKLIGRDYPNRAMSVMSETYPPGSDTGEEMLKHEGE 126
           S   +   + RS E  +   G   + ++      R++      YPP   T +   +H GE
Sbjct: 64  SVSLDSYSLVRSHERPDTSPG---YAVLAHQVSERSLLPFI-IYPPAEFTDKTFKEHLGE 119

Query: 127 EAAMVVEGRFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLV 174
           E   V EG+ E+   +E  ILE GD+ +FN++ PHR R+  D   +L+
Sbjct: 120 EFLFVHEGQVEVDFMNERVILERGDALHFNAQKPHRLRSVGDVQAQLL 167