Pairwise Alignments

Query, 435 a.a., hypothetical oxidoreductase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 427 a.a., Glycine/D-amino acid oxidases (deaminating) from Kangiella aquimarina DSM 16071

 Score =  224 bits (570), Expect = 5e-63
 Identities = 138/409 (33%), Positives = 213/409 (52%), Gaps = 14/409 (3%)

Query: 12  YPHSYYLDTAKEIYAHPQLEGSITADVCIVGGGFSGINTAIELRQRG-LSVVLLEAKRMG 70
           YP+SYY  T         L  ++  + CI+GGG++G+ TA+ L +RG  +V ++E  ++G
Sbjct: 4   YPNSYYAATLNSKLETNPLPQNLEVETCIIGGGYAGLMTALSLIERGHTNVAVIEKHKVG 63

Query: 71  WGASGRNGGELIRGIGHDPAQFINEIGQEGVSAIQQMGFEAVDIVRNRIQTHQIDCDL-Q 129
           +G SGRNGG +  G    P + I ++G+     +  +  E V+++R R++ + IDCDL  
Sbjct: 64  YGCSGRNGGFVFGGYSLGPRKLIKQVGEAKAKELYDLTIEGVNLIRERVKKYNIDCDLVD 123

Query: 130 MGYCDLAVKPRHMIELQEEFESLKSLGYKHEIKLLAQSQLGNVIGSDFYQGALVDMGSGH 189
            G           + L E+      +G   E + +    L   + +D Y GAL +  + H
Sbjct: 124 EGVLWANWFKDQSLLLDEQAFMRDKMGT--EWQYIEPEALREQLKTDRYHGALFEPNAMH 181

Query: 190 LHPLNLALGEARVARELGAQLFEYSAAEKIIQGDKPKVL-TAKGEVTCQYLVLAGNAYIG 248
            HPLN A G A+  +  G Q+FE  A   I      K++ T  G +  + +VL+G  YIG
Sbjct: 182 FHPLNYARGIAKQIQSQGGQVFEDCAVTDIDYKSATKIIKTVNGNIKAKNVVLSGGGYIG 241

Query: 249 HKLNSYIGGKVLPAGSYLLATEPLTQQQCKNIIPQNMAFADMRIALDYFHLSADRRLLFG 308
             L   +   +LP  +Y++ TEPL     +N I    A  D R A DY+    D R+L+G
Sbjct: 242 D-LCKPVANSILPIATYVMTTEPLGDD-LQNYINTQAAVYDTRFAFDYYRPLKDTRILWG 299

Query: 309 GLCTYSGKDPKDIEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRLPDASNI 368
           G    + K PKD++  LR +L KVFP+LK V++DY W G +G   ++M QIG L  A N+
Sbjct: 300 GRINANTKKPKDLDHILRHDLAKVFPELKDVKVDYNWQGWMGYARHQMAQIGEL--APNV 357

Query: 369 FFAQAYAGHGVNATHMAAKLLAEAICQQAGHFDVFAKIKHMTFP--GGP 415
           ++   + GHGV  T  A ++LA AI +Q    D +   +    P  GGP
Sbjct: 358 WYGIGFGGHGVAPTTTAGEILAAAITKQN---DTYKNFQPWGLPWNGGP 403