Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 3/237 (1%)

Query: 7   LKTFVTLAECKHFGKAAAALHMTQPNVSLHIKQLEQNTRVKLIERNP--FRLTQAGFRLL 64
           ++ F+ +A+   F  A   LH++Q  +SL IK LE+    +L  RN     LT  G  LL
Sbjct: 6   MRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPEGESLL 65

Query: 65  ESSQKTLMELQVCQADLNAINDLSQGTLTIAASDIISRLLLIQPFQLFKAEFPGIDFSLL 124
             +++ + +    + +L     L +G +T+AA    +  LL    ++F+A +P ++ ++ 
Sbjct: 66  PLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKIFRARYPQVNVTVH 125

Query: 125 NTTSFQASELVTNAEADLGFVIAQKESQPLHFTELQQIKWCALGNNLALWQQSQGRDDMP 184
           +  + Q  E+V + + +LG      E   L FT L   ++ A+    +   +    D   
Sbjct: 126 DLINEQVLEMVRDRQVELGVAFEPAEGSSLAFTPLYLDRFIAVVPGDSPLAECAEIDWKT 185

Query: 185 LAEQPTLILLGHDTRTRELLDPALPSLNLPRYRIMEVGSVDAQIDWAEAGFGVAIVP 241
           L EQP  I L   +  R +L+  L +L++     +E   +        +G GV+ VP
Sbjct: 186 LLEQP-FITLQRPSTVRVMLEEHLGALHMKLPVALESHQLATVGKMVASGLGVSAVP 241