Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 23/288 (7%)

Query: 1   MLELHWLKTFVTLAECKHFGKAAAALHMTQPNVSLHIKQLEQNTRVKLIERNP--FRLTQ 58
           M+E   L+ F+ +AE  HF KAA  LHM QP +S  I +LE+     L+ RN    RLT 
Sbjct: 1   MIETRLLRQFIAVAEELHFHKAAQRLHMAQPPLSQAINRLEEKLGFGLLLRNKRGVRLTA 60

Query: 59  AGFRLLESSQKTLMELQVCQADLNAINDLSQGTLTIAASDIISRLLLIQPFQLFKAEFPG 118
           AG   L+++ +TL EL+        ++    G LTI A  I     L+   + F+  +P 
Sbjct: 61  AGAAFLDTAYRTLAELEQGIEYARNVSAGVSGKLTITAISIAYYDSLLNRLRRFRETYPN 120

Query: 119 IDFSLLNTTSFQASELVTNAEADLGFV------IAQKESQPLHFTELQQIKWCALGNNLA 172
           +  ++    S   ++ +   EAD+GF+      +   E++ L   + Q +      + +A
Sbjct: 121 VQLTIREMPSASQAKALLAGEADIGFMRRLPLPVGTLEARLL--LDEQIVMALPASHPMA 178

Query: 173 LWQQSQGRD--DMPLAEQPTLILLGHDTRTRELLDPA--LPSLNLPRYRIMEVGSVDAQI 228
            ++    R+  D      P  +  G+  +   L + A   P +      + E   +   +
Sbjct: 179 RFEAVDLREFADEDFVFTPQALGGGYHAQLVALCESAGFYPKV------VQEAAQIHTLL 232

Query: 229 DWAEAGFGVAIVPEFSIYTKTNLKSK---ITPLPQFPSTSLGYIVRQN 273
                GFGVA+VP   + +    + +   I P+   P   LG  ++ N
Sbjct: 233 GLVACGFGVALVPASFVRSTPRERVQFCPIRPIDDQPPPGLGLYMKWN 280