Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 287 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 9/243 (3%)

Query: 2   LELHWLKTFVTLAECKHFGKAAAALHMTQPNVSLHIKQLEQNTRVKLIERNPFR--LTQA 59
           + L  L+ F  +A    F +AA  L ++QP V+ H+K LE++ ++ L+ R   R  LT+ 
Sbjct: 1   MNLFQLRAFDAVAREGSFTRAAERLFISQPAVTGHVKALEEHYQITLLRRTARRVELTEE 60

Query: 60  GFRLLESSQKTLMELQVCQADLNAINDLSQGTLTIAASDIISRLLLIQPFQLFKAEFPGI 119
           G RL   ++      +  QA L A   L  G L +AA D   R++ +    L +  +PG+
Sbjct: 61  GTRLAAITRAMFGLAEEAQAMLEANRQLLTGRLEVAA-DGPHRVMPM--LALLRERYPGV 117

Query: 120 DFSLLNTTSFQASELVTNAEADLGFVIAQKESQPLHFTELQQIKWCALGNNLALWQQSQG 179
             +L    + +    +    AD+  +   +  + LH   L + + CAL      W  +  
Sbjct: 118 TVNLRLGNAQETLAALLGEHADVAVLTEIEPRKGLHLQNLCESRLCALLPVGHAW--ASA 175

Query: 180 RDDMPLA--EQPTLILLGHDTRTRELLDPALPSLNLPRYRIMEVGSVDAQIDWAEAGFGV 237
           R+D+PLA   Q  ++L    + TR   D A     +    ++E+ S +A  +   +  G+
Sbjct: 176 REDLPLAALHQQIMVLREPSSTTRRTFDKACIKAGVQPRVLLELDSREAVTEAVASQLGI 235

Query: 238 AIV 240
            +V
Sbjct: 236 GVV 238