Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 26/296 (8%)

Query: 3   ELHWLKTFVTLAECKHFGKAAAALHMTQPNVSLHIKQLEQNTRVKLIERNPFR--LTQAG 60
           EL  +++FV +AE   F +AA ALH++QP +S  IK+LE+     L+ER   R  LT  G
Sbjct: 4   ELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVG 63

Query: 61  FRLLESSQKTLMELQVCQADLNAINDLSQGTLTIAASDIISRLLLIQPFQLFKAEFPGID 120
              L  +++ L + +     +  + +   G +T+A     +   L    + +  ++P I 
Sbjct: 64  RDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIR 123

Query: 121 FSLLNTTSFQASELVTNAEADLGFVIAQKESQPLHFTELQQIKWCALGNNLALWQQSQGR 180
             LL+ ++    E V   EAD G  +   +   + F  L Q  +      LA       R
Sbjct: 124 IRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFV-----LAC------R 172

Query: 181 DDMPLAEQPT----------LILLGHDTRTRELLDPALPSLNLPRYRIMEVGSVDAQIDW 230
            D PLA + +          LI +G  +  R LLD AL  LNL      EV  +   +  
Sbjct: 173 RDHPLANRASVTWTELADYRLIGVGRLSGNRMLLDHALSGLNLRPKWFYEVQHLSTSLGM 232

Query: 231 AEAGFGVAIVPEFSIYTKTNLKSKITPL--PQFPSTSLGYIVRQNQILSKAIKQLL 284
            EAG GV+ +P  ++    +      PL  PQ   T LG + R+   LS A ++ +
Sbjct: 233 VEAGLGVSAMPSLAMPNADHPTLVSVPLIEPQVTRT-LGLVYRRGASLSPAAEKFV 287