Pairwise Alignments

Query, 143 a.a., acetoin utilization protein AcuB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

 Score = 50.1 bits (118), Expect = 4e-11
 Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 3   IIIADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAISPNL 62
           I  A +M   V     D  L  A  +    +   L VL   KL G++S  DL   + P +
Sbjct: 239 ITAASVMSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQHGKLVGIVSLSDL---VGPAM 295

Query: 63  GNGAETSKDLETLQK-RIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLENGDLVG 121
             G  + + L   Q  R+ QVM+R  V+V+    L+     L E  + CLPVL+   LVG
Sbjct: 296 QRGRFSWRGLFGRQAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVG 355

Query: 122 IVTWKDLL 129
           ++T  DL+
Sbjct: 356 VITQTDLI 363



 Score = 33.1 bits (74), Expect = 5e-06
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 5   IADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEYKLEGVLSERDLLRAISPNLGN 64
           +A +M  RVV+V     L     +  +   H L VLD  KL GV+++ DL+  +   L +
Sbjct: 313 MAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVITQTDLIAGLKRQLLS 372

Query: 65  GAETS 69
             E S
Sbjct: 373 KIEAS 377