Pairwise Alignments

Query, 454 a.a., DNA repair protein RadA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 455 a.a., Lon protease 2 from Alteromonas macleodii MIT1002

 Score =  664 bits (1714), Expect = 0.0
 Identities = 327/454 (72%), Positives = 392/454 (86%)

Query: 1   MAKNKTAYVCNECGQDFPRWQGQCSACHEWNTITEVRLGAASPGRGTKFAGYAGAGSSEV 60
           MAK KTAYVC++CG +FPRWQGQCS C  WNTI+E  + +A        +GYAG  ++++
Sbjct: 1   MAKRKTAYVCSDCGAEFPRWQGQCSECKAWNTISEFVVASAKSVARQTTSGYAGQTAAKI 60

Query: 61  KTLDQIDLNALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAEQM 120
           +TL+ IDL +LPR  S F ELDRVLGGGIVPG+A+LIGG PGAGKSTLLLQ +C +A+  
Sbjct: 61  ETLNAIDLESLPRFSSTFKELDRVLGGGIVPGAAMLIGGSPGAGKSTLLLQVMCQMAKSE 120

Query: 121 PALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEIALQESPKVIVVDSIQVMH 180
            ALYVTGEESLQQVAMRA RL LP +KL ML+ET+VE IC++AL + PK++V+DSIQVMH
Sbjct: 121 TALYVTGEESLQQVAMRAKRLNLPDDKLMMLAETNVETICDLALTKKPKIMVIDSIQVMH 180

Query: 181 MSDVASSPGSVSQVRESASYLTRFAKQHGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF 240
           ++DV S+PGSVSQVRESA+YLTRFAKQ+ IA+ +VGHVTKDG+LAGPKVLEHCID S+M 
Sbjct: 181 VTDVQSAPGSVSQVRESAAYLTRFAKQNHIAMFIVGHVTKDGNLAGPKVLEHCIDSSMML 240

Query: 241 EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMVV 300
           EG+SD RYRTLRSHKNRFGA+NELGVFAMTE+GLKEV+NPSAIFLSRG+ E+ GS VMV+
Sbjct: 241 EGESDGRYRTLRSHKNRFGAVNELGVFAMTEKGLKEVSNPSAIFLSRGDNETPGSSVMVI 300

Query: 301 WEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV 360
           WEGTRPLLVE+Q LVD S MSNPRR+AVG+D NRL+MLLAV+HRHG +QM+DQDVFVNVV
Sbjct: 301 WEGTRPLLVEIQALVDYSQMSNPRRIAVGLDQNRLSMLLAVLHRHGNVQMNDQDVFVNVV 360

Query: 361 GGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVEAAKHG 420
           GGV+V+ETSADL LLLAM+SSFR   LP DL+VFGEVGL+GEIRPVPNG ER++EAAKHG
Sbjct: 361 GGVRVSETSADLALLLAMISSFRNRSLPRDLIVFGEVGLAGEIRPVPNGTERIIEAAKHG 420

Query: 421 FKRAIVPRANVPKKPPVGMEVVGVSKLSEALEAI 454
           FKRAIVP+AN PK+   GM+VV V++LSEAL+A+
Sbjct: 421 FKRAIVPKANAPKQAINGMKVVPVARLSEALDAL 454