Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 207 a.a., Ribosomal RNA large subunit methyltransferase E from Pseudomonas putida KT2440

 Score =  249 bits (635), Expect = 3e-71
 Identities = 121/204 (59%), Positives = 156/204 (76%)

Query: 5   KRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGG 64
           +R+ SS  W+ EHF+D +VK AQK G RSRA++KL E+Q+KD+LIRPGM+V+DLGAAPGG
Sbjct: 3   QRSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGG 62

Query: 65  WSQVAVKLVGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDVVLSD 124
           WSQV  +L+G +G++IA DIL MD I  V F+QGDF  ++VL+ +L  VG   VD+V+SD
Sbjct: 63  WSQVTSRLIGGQGRLIASDILEMDSIADVTFIQGDFTHDEVLQRILEAVGDSHVDLVISD 122

Query: 125 MAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKV 184
           MAPNMSG+  VD PRAM+L ELALD+  +VL P G F +K+FQGEGFD Y+K V+  F  
Sbjct: 123 MAPNMSGTPAVDIPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDVYLKDVRSKFDK 182

Query: 185 VKTRKPDSSRARSREVYLVATGYK 208
           V+ RKP SSR RSRE YL+  G+K
Sbjct: 183 VQMRKPSSSRDRSREQYLLGRGFK 206