Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 244 a.a., 23S rRNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  165 bits (417), Expect = 8e-46
 Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 6/212 (2%)

Query: 2   SGKKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAA 61
           + K+R  SS  W+    +D YV  A++ G RSRAAFK+ +L ++  +++PG+ VVDLGAA
Sbjct: 30  TAKRRKLSSTLWLQRQLNDPYVHEAKRLGYRSRAAFKMIQLDERFHILKPGLRVVDLGAA 89

Query: 62  PGGWSQVAVKLVG-----DKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGAD 116
           PGGW+QVAV+ VG       GKV+  DIL  DP+ G   LQGDF  +   + L   +G  
Sbjct: 90  PGGWTQVAVEKVGALKPKGGGKVVGMDILEWDPLPGAITLQGDFLADDAPDRLKEALGG- 148

Query: 117 KVDVVLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMK 176
             DVVLSDMA   +G    D  R + LVE+AL    +VL P G+F  KVFQG      + 
Sbjct: 149 PADVVLSDMAAPTTGHPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKVFQGGTEKTLLD 208

Query: 177 AVKEAFKVVKTRKPDSSRARSREVYLVATGYK 208
            +K+ F  V+  KP +SR  S E Y+VATG++
Sbjct: 209 QLKKNFTTVRHAKPPASRQGSAETYVVATGFR 240