Pairwise Alignments

Query, 209 a.a., ribosomal RNA large subunit methyltransferase J (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 206 a.a., 23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166) from Kangiella aquimarina DSM 16071

 Score =  262 bits (669), Expect = 4e-75
 Identities = 129/203 (63%), Positives = 156/203 (76%)

Query: 6   RTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPGGW 65
           R+ SS+RWM EHFDD YVK +QK G RSRA +KLEEL QK +L+  G+TVVDLGAAPGGW
Sbjct: 3   RSKSSHRWMKEHFDDPYVKKSQKDGYRSRAVYKLEELDQKYKLLGKGVTVVDLGAAPGGW 62

Query: 66  SQVAVKLVGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDVVLSDM 125
           SQ A   +G++GK+ A DIL +DP+  VDF+QGDFREE VL  LL ++G  K D+VLSDM
Sbjct: 63  SQYAAYKMGNQGKIFALDILEIDPLPDVDFIQGDFREEAVLNQLLDKIGQRKADLVLSDM 122

Query: 126 APNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKEAFKVV 185
           APNMSG D VDQPRAMYL ELAL++   VL   G++ VKVFQGEGFDEY++  ++ F  V
Sbjct: 123 APNMSGVDAVDQPRAMYLCELALELAQTVLTKGGNYVVKVFQGEGFDEYIRQCRQLFNKV 182

Query: 186 KTRKPDSSRARSREVYLVATGYK 208
             RKPD+SR RSREVY+V  GYK
Sbjct: 183 LIRKPDASRGRSREVYVVGLGYK 205