Pairwise Alignments

Query, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 500 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  139 bits (351), Expect = 1e-37
 Identities = 82/242 (33%), Positives = 136/242 (56%), Gaps = 4/242 (1%)

Query: 37  AKAYVLMDYYSGQIIAEENAYESLNPASLTKMMTSYVIGQEIKAGNVSPDDDVTISKNAW 96
           A   +L++  +G++I ++ A    +PAS+TK+MT YV    ++ G +  D  +T+S  A 
Sbjct: 78  ANPILLVEADTGRVIEQKEAGRPWHPASVTKLMTVYVALNAVRNGRLKFDTPITVSPAAA 137

Query: 97  SKNFSDSSKMFIEVGKTVKVSDLNRGIIIQSGNDACVAMAEHIAGTEGAFVDMMNSWSKQ 156
           ++     SKM  +VG  V + +  + ++++S ND    + E +AG+  AFV  MN+ +  
Sbjct: 138 AQQ---PSKMGFKVGTVVTLDNALKMVLVKSANDMAWLVGEGVAGSMPAFVAEMNATAAH 194

Query: 157 LGMRDSYFENSHGLDSENHKTTAYDMALLGAALIRDVPEEYRIYSEKYYTFNGIKQYNRN 216
           LGM  ++FEN +GL      TTA D+A+L  A+I   PE+  ++         +   N N
Sbjct: 195 LGMTGTHFENPNGLPDPAQVTTARDLAILARAIIYHFPEQEALFRIPAIKIGKVVLRNYN 254

Query: 217 GLLWDNSMNVDGIKTGHTSGAGYNLVASATKDGMRLISVVMGTQSEAARKAESKKLLTYG 276
            L+ D     DG+KTG   G+GYNLVA+AT+   RLI+V++G +S  AR  ++  +   G
Sbjct: 255 RLI-DRYPGADGMKTGFVCGSGYNLVATATRGNKRLIAVILGARSGTARTEQAALMFEKG 313

Query: 277 FR 278
           F+
Sbjct: 314 FQ 315