Pairwise Alignments

Query, 390 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

 Score =  338 bits (867), Expect = 2e-97
 Identities = 185/383 (48%), Positives = 245/383 (63%), Gaps = 8/383 (2%)

Query: 8   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTK 67
           +  LLLI+    P   A   +TP  P +AAK+YVLMD  SG ++ E N  E L PASLTK
Sbjct: 12  LPVLLLIT----PAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 68  MMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQS 127
           +MT+Y+   +I+ G +   D VT+S+NAW    +  S+MFI+VG  V VSDL  GIIIQS
Sbjct: 68  LMTAYIATLDIRRGQIGESDPVTVSENAWR---TGGSRMFIKVGSQVTVSDLLHGIIIQS 124

Query: 128 GNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSENHKTTAYDMALLGA 187
           GNDA VA+AEHIAG+E AF DMMN  +  LGM +S+F N  GL    H ++A+DMA L  
Sbjct: 125 GNDASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMATLAR 184

Query: 188 ALIRDVPEEYRIYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 247
           A+I   P  Y IYS+K + +N IKQ NRN LLW +   VDG+KTGHT  AGY +VASA +
Sbjct: 185 AIINVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDK-TVDGLKTGHTDEAGYCMVASAVR 243

Query: 248 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDL 307
           DG RLI+VV GT SE +R AE++KLLTYGFRFFET T Y+ G       +W G  S V  
Sbjct: 244 DGQRLIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQVKA 303

Query: 308 GVATDTPITVSRGRAKDLKANFELTKPLDAPLKKGETVGRLYFQLDGKDIAQFPLVTLQE 367
           G+A D  +T+ +G+ K L+A+  +   L AP+ KG+ +G++  +LD K I    L+ L  
Sbjct: 304 GLADDLTMTMPKGQLKRLQASMTMNPQLTAPIAKGDVIGKVEVKLDEKVIHSADLIALDG 363

Query: 368 VNEGSWFSKLVDYFKQLFSGWFS 390
           V EG +F ++ D  +  F G F+
Sbjct: 364 VEEGGFFRRMWDSIRLFFYGLFN 386