Pairwise Alignments

Query, 308 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., DUF808 domain-containing protein from Serratia liquefaciens MT49

 Score =  355 bits (910), Expect = e-102
 Identities = 192/311 (61%), Positives = 235/311 (75%), Gaps = 14/311 (4%)

Query: 1   MAGASLLTLLDDIASILDDVALMSKVAAKKTAGVLGDDLALNAQQVTGVSADRELPVVWA 60
           MAG+SLLTL+DDIAS+LDDV+LM+K+AAKKTAGVLGDDLALNAQQVTGV ADRELPVVW+
Sbjct: 1   MAGSSLLTLIDDIASLLDDVSLMTKMAAKKTAGVLGDDLALNAQQVTGVKADRELPVVWS 60

Query: 61  VALGSFRNKLILVPAAMLISAFIPWAVTPLLMFGGLFLCFEGFEKLHHSYSHRKDKHSEQ 120
           VA GSF NK ILVP A+LISAF PWA+TPLLM GG +LC+EGFEK+ HS +H+K    E 
Sbjct: 61  VAKGSFINKAILVPLALLISAFAPWAITPLLMVGGAYLCYEGFEKVFHSLTHKKQDGEEN 120

Query: 121 AEPDVADISDLAAYEKEKVQGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLAVIGIVM 180
            E   A+  D+AAYE+ KV+GAIRTDFVLSAEIIAITLG VA  + S Q   L  I IVM
Sbjct: 121 KEALNAN-EDVAAYEQRKVKGAIRTDFVLSAEIIAITLGTVAGATFSQQVIVLCGIAIVM 179

Query: 181 TVGVYGLVAAIVKMDDAGLYLSQRQGESSFTRFNRKVGFGLLSAAPLLMKSLTIIGTAAM 240
           TVGVYG+VA IVK+DD GLYLS++      +   R +G G++SAAP LMK+L+++GT AM
Sbjct: 180 TVGVYGIVAGIVKLDDLGLYLSRKS-----SALARSIGSGIVSAAPYLMKTLSVVGTIAM 234

Query: 241 FMVGGGILTHGLHWVSEQIHHA-EQWVSAIAVV---GPVLGLLTPSVLNAFFGIAAGAVA 296
           FMVGGGILTHGL      +HH  E W S   VV   G +L  + P++LN  FG+ AG V 
Sbjct: 235 FMVGGGILTHGL----PPVHHLFEDWASYATVVPTFGQILQGVIPALLNVVFGLVAGGVV 290

Query: 297 VLLMTGIQKLR 307
           +L+++ +  +R
Sbjct: 291 LLVVSALGAIR 301