Pairwise Alignments

Query, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 398 a.a., ribosomal RNA large subunit methyltransferase I from Pseudomonas putida KT2440

 Score =  215 bits (547), Expect = 2e-60
 Identities = 132/395 (33%), Positives = 212/395 (53%), Gaps = 10/395 (2%)

Query: 5   IKLKPGREKSLERRHPWVFSNGIHNVKGKP----EPGQTVDVVAHDGHWLGRGAWSGESQ 60
           ++LK   ++ L   H WV+SN + +V   P    + GQ   + A +G  LG  A S  + 
Sbjct: 6   LRLKANADRRLRAGHLWVYSNEV-DVSATPLQGFQAGQQAILEAANGKPLGIVALSPNNL 64

Query: 61  IQVRVWTFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDKY 120
           I  R+ + D +  +D+     R+  A + R+ L  +     YRL+  +SD LPG+ +D++
Sbjct: 65  ICARLLSRDIKLPLDKSLLVHRLNVALSLRERLFEQPC---YRLVYGDSDLLPGLVVDRF 121

Query: 121 ANVLVCQLLSMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGLASTMGLLHGTLPE 180
            ++LV QL S   +  +D ++  L ++     I  ++D  +R  EGL   +  ++G +P+
Sbjct: 122 FDILVVQLASATMEAHKDDVIAALVQVLKPSGILFKNDSAARDAEGLQRYVETVYGEVPD 181

Query: 181 MPLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAK 240
             + +EENG+K    V +G KTG++ D R NRA  A +VKGK VL+ F Y G +G+ A  
Sbjct: 182 W-VPLEENGVKFEAPVREGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQAGA 240

Query: 241 AGAASIENVDVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQYRDEGKTFDVIVLD 300
            GA+ +  VD S  ALD    N  +NG+S+  +   E DVF+ LR+ +   + FDVI+ D
Sbjct: 241 FGASEVFCVDASGFALDGVERNAALNGISE-KLTCIEGDVFEALRELKAAEERFDVIIAD 299

Query: 301 PPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAALDA 360
           PP F   K  L      Y+ +N  A+++LN  G+L++ SCS  +P D    I+  +A   
Sbjct: 300 PPAFIKRKKDLKNGEAAYRRLNEQAMRMLNKDGILVSASCSMHLPEDDLNNILLTSARHL 359

Query: 361 KREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395
            R +Q +ER  Q  DHP+  A  E  Y+K +  R+
Sbjct: 360 DRNMQLLERGGQGPDHPVHPAIAETRYIKSITCRL 394