Pairwise Alignments

Query, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., Ribosomal RNA large subunit methyltransferase F from Pseudomonas putida KT2440

 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)

Query: 250 DVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQYRDEGKTFDVIVLDPPKFADNKS 309
           D+  +AL +A+  ++ NGL        +A+   +L     EG+ FD+ + +PP  A    
Sbjct: 137 DIDPVALASAKAIVQANGLGKAITLRQQANRAHILSGLLQEGERFDLTLCNPPFHASRDE 196

Query: 310 QLNGACRGYKDIN----MIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAALDAKREIQ 365
              G+ R +K++        L +LN GG      C G        +++ ++   A+R + 
Sbjct: 197 ATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEG-GEIRFVTQLIGESVQYAERVLW 255

Query: 366 FIERLSQASDHP 377
           F   +S+AS+ P
Sbjct: 256 FTSLVSKASNLP 267